| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_87235 |
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| Symbol | TFP3 |
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| ID | 4836975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1453980 |
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| End bp | 1454694 |
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| Gene Length | 715 bp |
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| Protein Length | 163 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388290 |
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| Product | vacuolar ATPase V0 domain subunit c' (17 kDa) |
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| Protein accession | XP_001382501 |
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| Protein GI | 126131952 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01100] vacuolar ATP synthase 16 kDa proteolipid subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.291766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGGAA TAACAGGAGA CGCATATGCG CCTGCGTTTG CGCCCTTCCT AGGATTTGCC
GGATGCGCTG CTGCCATGGT TTTGTCATGT GCTGGAGCTG CCATCGGAAC AGCCAAGTCA
GGAGTCGGGA TCGCTGGTAT CGGGACGTTC AAGCCAGAAT TGATCATGAA GTCGTTGATT
CCCGTTGTCA TGTCGGGTAT CTTGTCTGTT TACGGATTGG TAGTAGCAGT ATTGATCGCT
GGAGGTTTGG CTCCCACAGA GACATATTCT CTTTTCAATG GCATTATGCA CTTGGCCTGT
GGATTATCAG TAGGATTTGC TTGTTTATCG TCGGGATATG CCATTGGTAT AGTCGGAGAC
GAGGGTGTGA GACAGTTTAT GCACCAGCCC AAGTTATTTG TTGGAATCGT GTTGATTTTG
ATTTTCGCCG AAGTCTTGGG ATTGTACGGC ATGATCATCG CCTTGATCTT GAACACTAAG
GGAAGTGGTT AGAGGAAAAG AGAAACAAGT TCATGATATA TTCCGATATC AGTTTGTATT
GTCATTTCTT ATTAACTTAC TTGAATTGTA TGTATCATGT CTGATTTCCC ATCCTACCTC
AATTATCATA TTTTGAATAC ACTTTACTTC ATTATATCTA CGATGTCACT ACATCGCTGA
TCGCTACTTC TAGTACTTAT ATATATTTTC AATAAAATAC TTCGTCACGT ACTGT
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| Protein sequence | MSGITGDAYA PAFAPFLGFA GCAAAMVLSC AGAAIGTAKS GVGIAGIGTF KPELIMKSLI
PVVMSGILSV YGLVVAVLIA GGLAPTETYS LFNGIMHLAC GLSVGFACLS SGYAIGIVGD
EGVRQFMHQP KLFVGIVLIL IFAEVLGLYG MIIALILNTK GSG
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