Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_82287 |
Symbol | BCY1 |
ID | 4836745 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 259455 |
End bp | 261265 |
Gene Length | 1811 bp |
Protein Length | 441 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640388060 |
Product | cAMP-dependent protein kinase regulatory subunit (PKA regulatory subunit) |
Protein accession | XP_001382284 |
Protein GI | 150863720 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.770378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AAACATATCA AGATCATTCT GTCAGACATA GGTTGCTACT GACGCCATTT GAACTACAAC ATTGATTACG AATTGATATT GCCTGATACA AATCCTGATA TAATTGCTAT CATCCATCAT TAATATCTAT CATTGCTATA TTTTTTTCAT CGCTGCTGAT TTTAATACCA CTAATTGATA ATTGACAATT GATAATTGAT ATTGCTATTG ATATCGATTA TATTGACATT ACAATTCCAT TGATATTCCT TCTTGAAACT ATCAGTTGTC GACATAGTCA TATTCATCAG ATATAAGTTA AATTAGTTAT AGTAATATTC TGGATATTGA TATCTCATAG CTGATTGCTC ATTGACTCCG AACTCATAAC TACCATTGCT GTCAACTTCT GTTACAAAAT CTTATCACCG ATAGCCGTCA CCTATAGATC TATAATGTCC TCCCAGTTCA CGGACGAGTT GACCCAGTTG CAGAAGGACA TCAACACTCA AAAGCCGGCC GATGTCTTGC AGTTCTGTGC CAACTACTTC AACAACAAGT TGCAAGCACA GAGATCTCAG TTGTGGAACC AGCAGGGCAA GGCCAACGCT GCTGGCATCA ACTTGTTCCC AAATGTAGAT GTTCTGAATC CGTATGTTAA CGACAGACAG CCCTCGTTCA AGTCTCCCTT CAGCGTCAAC GATCCCCATC TGATCCACGA CGACGATCCA CACAGTGGCC CAGCACGTGC TTCTCCAGCT TTGGGCGTAG CTGAAGAAGT CGAAAACGGA GTTGCAGCTG CTGATTCTAC TTCTGCCTCT TCTGCTGGAG GAATCTTCAA AAACGACTTC AATGTGAAAA CTCCCGCTTC GTCCAAAGCA GACCCTACTT TGGATCCCAA CGATCCGTCA GCTGCTGCTG CTGCCTCTGG CTCCGGAAAC GGAAAAGGTC CGTTTTCCAA GCTCCTGTCG AAGATCCCAA TTGCCTTCAA TGCCAACAGA AGAACATCTG TTTCTGCTGA AGCATTAAAC CCTGACAAGT TTAAGTCAGA CTCGTGGAGA CCGCCCATCA ACAACTTGAC ATCGTCGCAA AAAGCAGCCT TGTCGAAAAA CCTTGCTTCT AACTTCCTTT TCAAGCAGTT GGACGACGCG TCCAAGAAGA CAGTTATAGA AGCATTGTCC AACAAGACCT TCTCTAAAGA CACTGAGATC ATCACTCAAG GTGATGAGGG AGACTTTTTC TACGTCATTG AATCAGGTAC TGTAGACTTC TACGTTAATG GTGCTAAAGT TAGCTCAAGC AACGAAGGCT CTTCCTTTGG TGAATTGGCC TTGATGTACA ACTCCCCCAG GGCTGCCACA GCAACCGCTG CTACCGATGT CACATGCTGG GCGTTAGACA GAGCCACTTT CCGTAGAATC TTGTTGGAAG GAACATTCAA CAGACGTCTT ATGTACGAAG ACTTCTTAAA GGACGTAGAT GTGCTCAAAT CTCTCCTGGC TCACGAAAGA TCGAAATTGG CAGATGCTTT AAGCACTGAG ATTTACCATA AAGGAGACAA GATCGTCACT GAAGGTGAAC AGGGAGAGAA CTTCTATCTC ATTGAGAGTG GAAACTGCCA GGTGTACAAG GAAAAAGAGG GTAACATCAA GCAGTTGACC AAAGGAGACT ACTTCGGAGA GGTTGCCTTA TTGAACGACT TGCCTAGACA GGCTACTGTT GAAGCCTTGG ATACTGTCAT TGTAGCTACT TTGGGTAAGT CAGGTTTCCA GAGATTGTTG GGTCCAGCCG TAGAAGTATT GAGACTCCAG GATCCAACCA AGGCACACTG A
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Protein sequence | MSSQFTDELT QLQKDINTQK PADVLQFCAN YFNNKLQAQR SQLWNQQGKA NAAGINLFPN VDVSNPYVND RQPSFKSPFS VNDPHSIHDD DPHSGPAPAD STSASSAGGI FKNDFNVKTP ASSKADPTLD PNDPSAAAAA SGSGNGKGPF SKLSSKIPIA FNANRRTSVS AEALNPDKFK SDSWRPPINN LTSSQKAALS KNLASNFLFK QLDDASKKTV IEALSNKTFS KDTEIITQGD EGDFFYVIES GTVDFYVNGA KVSSSNEGSS FGELALMYNS PRAATATAAT DVTCWALDRA TFRRILLEGT FNRRLMYEDF LKDVDVLKSL SAHERSKLAD ALSTEIYHKG DKIVTEGEQG ENFYLIESGN CQVYKEKEGN IKQLTKGDYF GEVALLNDLP RQATVEALDT VIVATLGKSG FQRLLGPAVE VLRLQDPTKA H
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