| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82096 |
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| Symbol | AFG3 |
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| ID | 4836676 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1077469 |
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| End bp | 1080153 |
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| Gene Length | 2685 bp |
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| Protein Length | 787 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640387991 |
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| Product | AAA+-type ATPase |
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| Protein accession | XP_001382432 |
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| Protein GI | 150863826 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.176589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GAATACATTT GCACAATAGT GACAGAGTGG AGCTTGATTT TATACAACGG TTAGTACATA
TATTAATAAA AACTCGATTT TCCAACAATA TATCGTACTC ACTTTTCATA TTTCATTTTC
CAATTCCATT TAGACCTTCA CAATTCAGTT TCGTATGTCA TGTTGATAAG CAATTCCGTT
CGTATAATAA GAGGCACGAC TTCGCCGGTG CTGGTGCGGT CTATCAATTT TGCCTCTCGT
GGTTTGCTTT CTCGTAGCAC TAGAAGTGGT GTTTTCAGCA AAATTCACAT ACCAACTTCC
ATAGTGAAAA ATTCGCAAGT GAGGGCATTC TCATCGCTCA ACAGCCATTT ACTATTCAGG
AACTCCCAGA TCACTCTCAA GGACAAAGAG AATGACGACA AGAAAGAGGA AAAGCCAAAG
AAGAAAGAAA TGGATAAAGA GGAAAAGGAC TTACGCGAAG AAATCAAGGA AAGGTTAAAG
AAAGAGAACC CTAAGATAGA CCCCAACAAT ATAAAAATCT ACCAGTTAGA CAGTAAGACT
ATCGCTCGTT ATGCAATCTT GTCGACAATC TTCACTGTCG TATTAACCAT TTACGTTCTT
TCTGGTGATC GTGAAAAGAA TGAATTATCG TTCCAGGACT TCAAGACAAA TTATCTTGAG
AGAGGTCTCG TGACCAAGTT AACTGTGATC AACAGATTTG CTGTAGAAGC TGAATTGATT
GCTGGTGCTG TTTCCGATCA AACCTTTCAG ACTTTGGGTG GAACCCCAGC TGTAGTTTTC
ACTATTGGCT CTGTAGAATT CTTTGAGGAA GAAATGAAAA TAGTTCAGGA CAAGCTTGGA
ATCTCTGTGA ACGAAAGATT GCCCATTGTT TACGAAGAAC GAGGTTCATG GCTCAACTAC
GTATTGCCCA TCTTGCCCAC AGTGTTGTTA ATTGGTGGAT TGTGGTATTT AACGATGAGA
AGAACCACTC AGAATGGAGG TGCTGGCGGT CCTGGAGGCA TCTTCAAGAT AGGAAAGTCC
AAGGCTAAGT TGTTTAACCA GGAAACTGAA GTCAAAATCA AGTTTAAAGA CGTAGCTGGC
TGTGACGAGT CGAAAGAAGA AATCATGGAA TTTGTCAAGT TCTTACAAGA TCCCAAGAAG
TACGAGAGAT TAGGTGCAAA GATTCCTAGA GGTGCCATCT TGTCTGGACC ACCAGGTACT
GGTAAGACTC TTTTGGCAAA AGCTACTGCT GGAGAAGCCG GAGTACCATT TTTGTCCGTG
TCTGGTTCTG AATTCGTGGA AATGTTTGTA GGTGTAGGAG CTTCACGTGT TCGTGATTTG
TTCAAGACCG CTAGAGAAAT GGCTCCTTCG ATCATTTTCG TGGATGAAAT TGATGCTATT
GGTAAAGAAA GAGGTAATGG AAAGATTGGA GGTAATGATG AAAGAGAAAA TACCTTGAAC
CAGTTGTTAG TGGAAATGGA TGGTTTTGAA AGCGGAGACC ATGTAGTCGT TTTGGCTGGT
ACCAATCGTC CAGACATCTT GGATAAAGCC TTGTTGAGAC CTGGTAGATT CGACAGACAT
ATTTCTATCG ACACCCCAGA CATTGATGGG CGTAAGCAAA TATTTAAGGT CCATTTAGCC
AAGTTGACAT TGAAATGCGA CGAAGACATC AAAGCTACAC AAAAGGATAT TGATTTTGCC
AAATACCAAG AGTTGAAATC CAAAGCTATT GACGATTTGG CTGGAAGATT GAGTGCGTTG
ACCCCGGGCT TTGCTGGTGC TGATATTGCC AACTGTTGCA ACGAAGGAGC TTTGATTGCT
GCAAGAGAAG ATGCCACTTC CGTAGATGTG TACCATTTTG AACAAGCCAT CGAGAGAGTA
GTGGCTGGCT TAGAAAGAAA ATCCCGTGTT CTCAGCTTGG AAGAAAAAAA GACTGTTGCT
TATCATGAAG CCGGTCATGC TATATGTGGT TGGTTTTTAG AGTTTGCTGA TCCTTTAGTG
AAGGTCTCGA TCATACCCAG GGGCCAAGGG GCTTTGGGAT ATGCGCAATA CCTTCCTAAG
GACCAGTACT TGATTTCCAA GGAACAGTTC ATGCACAGAA TGACAATGGC TTTGGGTGGA
AGAGTCAGTG AAGAGCTTCA CTTTGAAACT GTTACCAGTG GAGCTTCCGA CGACTTCAAA
AAGGTCACAC AAATGGCTCA ACAGATGGTG TTGAAGTTGG GAATGTCCGA GAGTCTTGGA
AATATCTGCT ATGAATCCGG AGATGACGGT AACGGGTTCA AAGTTCACAA CAGCTACTCT
GAGTCTACAG CCAGGCTAAT TGACACTGAA ATTAAAAGTT TCATTGATGA AGCTTACATT
GCCTGTCACA AATTATTGAC GGAAAAGATC GACTTGGTAG ACAAGGTTGC TGAAGAATTG
TACAAGAAGG AAGTGTTGAC CAGAGAAGAT ATGATCAGAT TGGTGGGACC ACGTCCTTTT
GCCGAAAGAA ACGATGCCTT CGACAAGTAC ATCAAGGGTA CTGATGCCTT TAAAGGTAGA
CCACTGGCCA AGGGCAAGAA GTATGAGTTG AATGACGACG AGGCTACCGC TTGAATATTC
GTATATATTC GAAATGTTCC TGTAAATAGA CAAAATTAGT ACATTTCTAA TTATCCAAAA
ATATCATTAC ATATATATAC ACTAAATATA ACATTTTCTG TATCT
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| Protein sequence | MLISNSVRII RGTTSPVSVR SINFASRGLL SSKNSQVRAF SSLNSHLLFR NSQITLKDKE
NDDKKEEKPK KKEMDKEEKD LREEIKERLK KENPKIDPNN IKIYQLDSKT IARYAILSTI
FTVVLTIYVL SGDREKNELS FQDFKTNYLE RGLVTKLTVI NRFAVEAELI AGAVSDQTFQ
TLGGTPAVVF TIGSVEFFEE EMKIVQDKLG ISVNERLPIV YEERGSWLNY VLPILPTVLL
IGGLWYLTMR RTTQNGGAGG PGGIFKIGKS KAKLFNQETE VKIKFKDVAG CDESKEEIME
FVKFLQDPKK YERLGAKIPR GAILSGPPGT GKTLLAKATA GEAGVPFLSV SGSEFVEMFV
GVGASRVRDL FKTAREMAPS IIFVDEIDAI GKERGNGKIG GNDERENTLN QLLVEMDGFE
SGDHVVVLAG TNRPDILDKA LLRPGRFDRH ISIDTPDIDG RKQIFKVHLA KLTLKCDEDI
KATQKDIDFA KYQELKSKAI DDLAGRLSAL TPGFAGADIA NCCNEGALIA AREDATSVDV
YHFEQAIERV VAGLERKSRV LSLEEKKTVA YHEAGHAICG WFLEFADPLV KVSIIPRGQG
ALGYAQYLPK DQYLISKEQF MHRMTMALGG RVSEELHFET VTSGASDDFK KVTQMAQQMV
LKLGMSESLG NICYESGDDG NGFKVHNSYS ESTARLIDTE IKSFIDEAYI ACHKLLTEKI
DLVDKVAEEL YKKEVLTRED MIRLVGPRPF AERNDAFDKY IKGTDAFKGR PSAKGKKYEL
NDDEATA
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