| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82083 |
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| Symbol | RAD5 |
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| ID | 4837073 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 141769 |
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| End bp | 145377 |
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| Gene Length | 3609 bp |
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| Protein Length | 1127 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640388388 |
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| Product | ATPase/DNA helicase |
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| Protein accession | XP_001382790 |
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| Protein GI | 150864093 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0870755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.86553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTCCTTGTCC TTTTCGACGT ATTAATGACG ATCGTGAAAC AGCGCTTCTT CAAGCAAGCT
TCAGTGAAGA AAGAGCTGCA AAATTCCAAT TCATTTCCCA ACGCCTCTTC GAGTGAAGCA
TCGCTCTTTG TTCAAGACGA AGATCTAGAA GACGTTACAG AAGTGAGTGC CACTGGTATA
GTAGTCTCCA CTACAAACAA AAATACAATT CAGAATGAGC CTGTAACTTC AGATAAAATG
TCCGATGAGA CTTTGGCTCG AGGTCTCTTA GAGAGCCAGC TATCGGCCAC CGTTGGCTAC
ATTGCACCTC ATATAGTGAA CTATCTATAT TCAAAGTATC ATACGGAAGC CAATTTCGTG
CGGCTAGCCA TTAACGAATA CTTAAATGGC ATAAATCCAG AAGATCTCGA TAAACAGATC
CAAATCGAAC AAGAAGAAAG AGAGCAAAGA CTGAGTAAGA GACCTTTGGA AGAACAAGAT
GTTGCATCTC AACTAGACTT GCTCTATGGG AGAATGCAGG CAGAATCCAG CAGTATCAAC
ATGGAAAGGA TCAGACTGAA TTGGAAACGA TTTATAGGTT CCGTTGACGT TCAAGCTTGG
GCTACTAGGC CAACCATGCA ACCATTACAG TATTCAGATA GACTTATTAT CAAGCGTTTG
ATACCGAGAA AATCGACCAT CAATAATAGT TCCATTATTA GACTTTGCAC AGTACCAAAG
AATACGATGG ATACAGGCAG AGAAATTGGA AGAATCCCAG AGGATTTGAC TCGGATCTTT
GCGCCATTAA TTGATCTTGA TATTGCCTTT TTCGAAGCTA CAGTGTTAGA AACGACAAAA
CGAAGACTTT CAACAGGCGA CTCTTTCATT ATACAAATAG ACATTTATTT GCAGAACACA
GCTTTCAAGT TTAAACAATT TGATGACGAC GACGCACAGG ACCTGAAACG TCAACGAACT
CAGGCTATCA AGCTCAATTT CAATTTCGCA ACCGAATCAG AAGGCGAGGC TACCCTTCGT
TTGCGTCAAT TTGCATTATC TAAACTTTTC GAAAGACTAG AAATAAAACC AACAAGAACA
TTAGACGGAA ATACAACTTC GGCTGATGTG GAAGACACTT CATTAGAACT TTCAACCCAA
AATCCAGAAG ATGAAGCCAT CGTTCTTGAC TCAGATAATG AGATAGATGT GGATGCTGAA
CAAGTGAAGC CTATTGACTC CGTAAATTTG GATCAGTTAA AGGAATTTTA CCAAGCAAAC
AACCAGTCCA AATTGCTTAA TAGCTTACCT GAGACTACGA CTCCACCAAA GGAAAACTTC
AGCTTGGATT TGAGAGCATA TCAAAAACAT GGCCTTTCAT GGATGTTAAC CAGAGAAAAA
GAGCATGATT TACTTGAGAA AATTGCAGCA GAAAATGGCG ATACCGCATT CTCAACCCAA
TCTCGAACTA CTGTGAGAGA AAGCTCAGAA GGTATTTTAA ATCCCTTATG GAGAAGATAC
AAGTGGCCCA AGAATTTATC ATTTAAGGCA CAAAAGAAAA CCGAAGAGGC AGAAGATAAC
AATGATAGAT ATTTTTATGC CAATATGTAT AATGGCGAAA TGTCACAGGA GAAGCCAATT
ATCAAGTCTA GTCTTAAAGG AGGCATACTT GCGGACGAAA TGGGGTTAGG GAAAACAATT
TCAGCTCTCG CGTTAATTAA TTCTGTGCCT TATAGCGCAA CTGAAGAGGC AAGGATATCC
ACTAAGCCAT ATGCTTCTAA GACTACTTTG GTAGTGGTTC CTATGTCGCT ACTTAACCAA
TGGAAGAGTG AATTTGACAA GACAAATAAT AATCCCAATC ATTTCTGTCA CATATACTAT
GGTGGCCAGA CTAGTTCCCT CTCATACCTT CTTGTAAACA ATAAGGCAAA AGATGTGCCA
GTGGTTATGT TAACCACGTA CGGCACTATT CTTAATGAGT ATACTAGATT AGCCAAACTG
AGGGACCCCA ACGGGAACTT GTCTCCCGTT GGTTTATATT CTGTTGACTA TTTCAGAATA
ATACTTGACG AAGGTCATAA CATTCGTAAC AGGTCTACAA AGACAGCAAA AGCTATATAC
GAATTGGCCC TGAGTAGGCG CTGGATTTTA ACTGGCACGC CTATTATAAA CAGATTGGAC
GATTTGTACT CCTTAGTCAG GTTTCTTGAT TTAGATCCAT GGAGTAACTT TTCGTACTGG
AAAACATTCG TAACATTGCC ATTTGAGCAA AAGAAGGTCA GCAAAGCATT AGATGTAATC
AAGTCTATTT TAGAGCCAAT CTTCTTAAGA AGAACAAAAA ATATGAAACT GAAAAGTGGA
AAGCCATTGG TCGAGCTCCC TGCAAAGCAG GTAATTATAG AAGAAATCAA GTTTAATGAT
AAGGAGGAAA AGTTATACAA TTGGTTAAAG GCACGAGCAA GCAGCACATT CAGAGAAGGC
TTGAAAAGTG GTCAGATTTT GAAGCAGTAC TCTCAAATTT TAACTCATAT TTTGAGATTG
AGACAAGCCT GCTGTCATAG GGATCTTTTG GGTAGTGAAA ATGACATGGA GGAAGATGCC
ACCGAAGTAC TCAAAGATGA AGAGACGGAT TCTTTTTTGA AGGGAATGTT TCAGTCAAAA
ATCGAAGGGT TTGAAAACGA GACAAAAATG AAAGAAGTCA TGTATAGTCT ATATGAAAGG
ATTGACCTCA AGGACTCCGA ATGCTCAATC TGTACGCAGA CACCAATTTC CATTGGGGAA
ATGGCTGTTA CTCCATGCGG ACACCAGTTT TGTTTCACTT GCCTTTTAGA ACATATTGAC
TTTCAAGAAA ATGACAAATC GCGTCTTTGT CCCAATTGCA GGGATCCTAT ATCCAAATAT
AGACTTTTCA AATTGAGATC CAGAGCCACC TCACATAAAG AAATTAATTT CCATAGTACC
AAAGAGTTAA GAGACCCTTC CAAAGACTAT CCATTTCAAA TTTACTTGTA TGACCCCGAT
AAGTCTTCGT CAAAGATCCA AGCATTAATC ACTCATTTGA GAACCATCAG GGACCTGAAT
CCAGGTGAAA AAGTCATTGT ATTCTCTCAA TTTTCTTCAT ATCTTGATAT TTTAGAGAAT
GAACTTAAGA TTCAAGGCGG CAGAGATTTC GTTATACATA AATTTGATGG TCGGTTGCAA
TTGCTGGAAC GCCAGAAGGT TCTTGACAAG TTTAATGATA ATACTGGGCA TGACGGCGTA
ACTATCCTTC TTCTTTCCTT GAAAGCTGGA GGCGTTGGCC TAAATCTTAC CACAGCGTCG
AGAGCATTTA TGATGGATCC ATGGTGGTCC CCTAGTGTGG AAGATCAAGC CATTGATAGA
ATTCATAGGA TTGGTCAGAA TGAAACAGTC AAGGTTGTTC GTTTTATCAT GTCCAACAGC
ATCGAGACTA AGATGCTCAA AATTCAGGAA AGGAAGAAGC AGATCGGAGA AATTGTGGCA
GCCGAAGAAG AGGAAAGGAG AAAGAGAAGA ATTGAAGAAA TCCAAATTCT TTTCGAGGAG
TAGTTATTGT ATATACAACC TGTTGAAAAC CTATCTCATT CTCTACAATG AAATTATAAA
GTCACCTTC
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| Protein sequence | MTIVKQRFFK QASVKKESQN SNSFPNASSS EASLFVQDED LEDVTEVSAT GLLESQLSAT
VGYIAPHIVN YLYSKYHTEA NFVRLAINEY LNGINPEDLD KQIQIEQEER EQRSSKRPLE
EQDVASQLDL LYGRMQAESS SINMERIRSN WKRFIGSVDV QAWATRPTMQ PLQYSDRLII
KRLIPRKSTI NNSSIIRLCT VPKNTMDTGR EIGRIPEDLT RIFAPLIDLD IAFFEATVLE
TTKRRLSTGD SFIIQIDIYL QNTAFKFKQF DDDDAQDSKR QRTQAIKLNF NFATESEGEA
TLRLRQFALS KLFERLEIKP TRTLDGNTTS ADVEDTSLEL STQNPEDEAI PIDSVNLDQL
KEFYQANNQS KLLNSLPETT TPPKENFSLD LRAYQKHGLS WMLTREKEHD LLEKIAAENG
DTAFSTQSRT TVRESSEGIL NPLWRRYKWP KNLSFKAQKK TEEAEDNNDR YFYANMYNGE
MSQEKPIIKS SLKGGILADE MGLGKTISAL ALINSVPYSA TEEARISTKP YASKTTLVVV
PMSLLNQWKS EFDKTNNNPN HFCHIYYGGQ TSSLSYLLVN NKAKDVPVVM LTTYGTILNE
YTRLAKSRDP NGNLSPVGLY SVDYFRIILD EGHNIRNRST KTAKAIYELA SSRRWILTGT
PIINRLDDLY SLVRFLDLDP WSNFSYWKTF VTLPFEQKKV SKALDVIKSI LEPIFLRRTK
NMKSKSGKPL VELPAKQVII EEIKFNDKEE KLYNWLKARA SSTFREGLKS GQILKQYSQI
LTHILRLRQA CCHRDLLGSE NDMEEDATEV LKDEETDSFL KGMFQSKIEG FENETKMKEV
MYSLYERIDL KDSECSICTQ TPISIGEMAV TPCGHQFCFT CLLEHIDFQE NDKSRLCPNC
RDPISKYRLF KLRSRATSHK EINFHSTKEL RDPSKDYPFQ IYLYDPDKSS SKIQALITHL
RTIRDSNPGE KVIVFSQFSS YLDILENELK IQGGRDFVIH KFDGRLQLSE RQKVLDKFND
NTGHDGVTIL LLSLKAGGVG LNLTTASRAF MMDPWWSPSV EDQAIDRIHR IGQNETVKVV
RFIMSNSIET KMLKIQERKK QIGEIVAAEE EERRKRRIEE IQILFEE
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