| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82025 |
|---|
| Symbol | |
|---|
| ID | 4837009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 675060 |
|---|
| End bp | 676531 |
|---|
| Gene Length | 1472 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640388324 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382893 |
|---|
| Protein GI | 150864175 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.830676 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CCACTGCAGG CCGGATGAAG ATCAAGACCA TTAAACGTTC GTCCGAGACG TATGTTCCGG
TTAGAAACAC TCAGGAATCT GCGCTTCCGC GGAACTTAAA CCCTGCTCTC CATCCTTTTG
AAAGGGCCAG AGAATATACC AAAGCCTTAA CTGCTACCAA GATGGAACGG ATGTTTGCTC
AGCCATTTGT AGGGCAGCTA GGAGACGGGC ACAGAGATGG GGTTTATTGT ATAGCTAAGA
ACTTCTCGAC TACAAACCAA GTAGCTTCTG GATCAGGCGA TGGTGTTATC AAATACTGGA
ACATGACTTC AAGACAAGAG TCAGTCAGCT TCAGAGCCCA CTACGGGATG GTCGGTGGCC
TTTGTGTGAC ACCAAAGCAA CAGCACATGT TATCTTGCGG TGACGACAAG ACGATCAAGT
TGTGGTCAGT GAAAAGTGAC GAATTTGAAA CTGGATTTGG AGACGAAGAG GTGTACAGCA
ACAAAAGCAT GGGTTTGGTC AAGACATTTT TGGGCGAGCA TGCCTTCAAA GGCTTGGACC
ACCACCGTGA TGACGATCTT TTTGTTACAG GCGGTGCCAC CATCCAGTTG TGGGACATGC
ACCGTTCAAA GTACATCTCA GACTTGCTGT GGGGAGCAGA CAATATCACC ACAGTCAAGT
TCAACCAAAC CGAAACCAGC ATTATCGCTT CAGCTGGCTC TGACAACTCG ATTGTTTTAT
ACGATGTCAG AACCAACTCC CCTATACAGA AAGTTGTGAC TTCCCTTAGA ACTAATGCCA
TAGCCTGGAA TCCCATGGAA GCGTTTAACT TTGCATCAGC CTGTGAAGAC CACAATGGGT
ATCTCTGGGA TATGCGTAAA TTGGACAGGT CTCTCAATGT GTACAAGGAT CATGTAGCAG
CCGTTATGGA CATCGATTTC TCACCCACGG GTGAGGAAGT CGTTACTGGA TCTTACGACA
AGACGATAAG AATCTTCCGT GCCAGAGAGG GCCATTCCCG TGATATCTAC CATACTAAGA
GAATGCAGAG AGTGTTTTGC ACCAAGTTCA CTACTGACGC CAGATACATT TTGAGTGGTT
CTGACGACAC CAATATACGT TTGTGGCGTG CTAATGCTGC TGACAGATCG AACATCAAAT
CGTCCAGACA GAGGGCCAAG TTGGAATACG ACGCTGCCTT GAAGGAAAGA TACAAGCATA
TGCCAGAAAT CAAGAGAATA TCAAGACACC GTCATGTGCC CAAGACCATC AAAAAGGCTG
GAGAAATCAA ACGTGTTGAG ATTGACAGCT TGAAGAAGAG AGAAGACAAT GAGAGAAGAC
ACAGCAAGCC AGGTTCCAAA CCTTTCAAGT CAGAGAGAGA AAAGCATATC AGGGGAACAG
CAATCAAAGA AGATTAGACC CCTACAGACC TCAAGGGCCA TGTACATTAG TAATAGCATA
AATAATGAAA AGCGACATCA TAGAAGCATG GT
|
|---|
| Protein sequence | MKIKTIKRSS ETYVPVRNTQ ESALPRNLNP ALHPFERARE YTKALTATKM ERMFAQPFVG
QLGDGHRDGV YCIAKNFSTT NQVASGSGDG VIKYWNMTSR QESVSFRAHY GMVGGLCVTP
KQQHMLSCGD DKTIKLWSVK SDEFETGFGD EEVYSNKSMG LVKTFLGEHA FKGLDHHRDD
DLFVTGGATI QLWDMHRSKY ISDLSWGADN ITTVKFNQTE TSIIASAGSD NSIVLYDVRT
NSPIQKVVTS LRTNAIAWNP MEAFNFASAC EDHNGYLWDM RKLDRSLNVY KDHVAAVMDI
DFSPTGEEVV TGSYDKTIRI FRAREGHSRD IYHTKRMQRV FCTKFTTDAR YILSGSDDTN
IRLWRANAAD RSNIKSSRQR AKLEYDAALK ERYKHMPEIK RISRHRHVPK TIKKAGEIKR
VEIDSLKKRE DNERRHSKPG SKPFKSEREK HIRGTAIKED
|
|---|
| |