| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81660 |
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| Symbol | MSM1 |
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| ID | 4836955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 889185 |
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| End bp | 891001 |
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| Gene Length | 1817 bp |
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| Protein Length | 584 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388270 |
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| Product | methionyl-tRNA synthetase, mitochondrial |
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| Protein accession | XP_001382407 |
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| Protein GI | 150863806 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAT TCCCCAGACT CTCAAGGGCC AAAAGTGCCC TTCGAGGTAT TCGGTTCGCT
TCTTCGAAAC CATTTTACGT CTCTACGCCC ATTTTCTACG TGAATGCCAG TCCCCATTTG
GGCCATCTCT ACTCCATGCT TTTGGCAGAT ACCAGAACAA GATGGGAAAA ACTCGATCCA
AAGAAGCTGG CGTACTTTTT GACGGGCACA GACGAACACG GTTTGAAGAT ACAGACAGCG
GCGGAAAAAT CCGGTCTTTC TCCCAAGCAA TTGGTTGACT CAGTTTCTCA AAACTTCAAA
GTATTGGCCG AAAAGTTCAA TGTAGACTAC GACAGATTCA TAAGAACAAC TGATACTGAC
CATACAGAAG TAGTTCAGTT TTTCTGGAAC ATGATGATGG AGAAAGGATT CATCCACGAA
GGCTCTCACA GTGGCTGGTA CTCTGTCAGC GACGAGACCT TCTATCCAGA AACCCAGATA
GAAGAAGTTG TAGACGAGAA CGGAACCAAA AAGATGGTTA GTTCCGAGTC GAGAAGCGAA
GTTGTCTTCC AAGAGGAAGA AAACTACTTT TTCAAACTAT CGGACTTCCA GGATCAACTT
ATATCTTTCC TTGAAAAGAA TCCCAAGTTC ATCTTGCCTG AACACAGATA TACTCAGATC
TTGAACATTC TCAAGGAAGC ACCTTTACCC GATTTGTCCA TTTCCAGACC TTCGTCACGA
CTTAAATGGA GTATTGAAGT GCCTAACGAT CCTGAGCAGA AGATCTACGT CTGGTTTGAT
GCTCTTCTCA ATTATTTGAC GGCTACGGGT TATCCCCAGA CTTTCCCTGT CGAGAACAAC
AGATTCGTAA CTCTGCCAGA AAACCCCTGG CCAGCTACCC ATATCGTAGG CAAGGATATC
ATCAAGTTCC ATACAATCTA TTGGCCCATT TTTCTCCTAG CTGCGGGAAT AGAATTGCCA
AAACAGGTAA TCGTACACGC GCACTGGTTG AGCGATGGGT TCAAGATGAG TAAAAGCTTG
GGCAATGTTG TAGACCCATT TGATATCTTG GAGTACTATG GGGAGGACGC TGTAAGATTC
TTCTTAATGG AAAACTCTAA CATCCAGGAC GATTGTAAGT ACCGTGAAGA GCTTCTTCAT
CAGACTAGAG AAGCCATTAT TGGCAAATAT GCCAATTTGA TGTCTCGTTG TGGAAACAGC
AAGTTCGATA TTAGACAAAG TGTGGAAGAT TGGAGAAACG GCAGATTTAG CGACGTAGAT
ACTCTTATCA ATGAACAGGC ATTGAATAAG GACCAAACAC AGAGTATAAT AGAAGCCAGA
GACAACTTGG TTGCCAGCCT CAATGGTTTA TACACAAATA TGGATTCGAA ACTTGCTGAT
TTTGATCACC TGCGGGCCAT TCAGAACTGG TGGACTGCTG TGTACTATGG CAATCAGCTC
TTCCAGTTAT CCGAGCCTTG GCTCTATACA AAGCTCTTGA AGGATACTGC GGTGAGTGAC
GCCGATAAGG AAAGCTACCG AATCCTACAA AATTACTTTG TATTTTTGGC AGCTGAAACT
GTGAGAATAA CCTCTATTTT AATCACGCCT ATTGTCCCAC GTTTGTCGGA GAAGATCTTG
GACAGATTGA GTGTAGCTTC TGGAGCCAGA AACTCTGAAT ATTGTGAAGT GGGTGCCGAT
TTGCAGTTTG GCGTGGGTGC AAATTCAAAA CTGCACAGGT TGCCAATAGA GAAGGTGGCC
TTGAGAGGTG ATTAGATGTA AATAATATAG ACTTGTAGAT AGACATTGAT GAATATGAAT
AAACTGTACA ATAATAT
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| Protein sequence | MKTFPRLSRA KSALRGIRFA SSKPFYVSTP IFYVNASPHL GHLYSMLLAD TRTRWEKLDP
KKSAYFLTGT DEHGLKIQTA AEKSGLSPKQ LVDSVSQNFK VLAEKFNVDY DRFIRTTDTD
HTEVVQFFWN MMMEKGFIHE GSHSGWYSVS DETFYPETQI EEVVDENGTK KMVSSESRSE
VVFQEEENYF FKLSDFQDQL ISFLEKNPKF ILPEHRYTQI LNILKEAPLP DLSISRPSSR
LKWSIEVPND PEQKIYVWFD ALLNYLTATG YPQTFPVENN RFVTSPENPW PATHIVGKDI
IKFHTIYWPI FLLAAGIELP KQVIVHAHWL SDGFKMSKSL GNVVDPFDIL EYYGEDAVRF
FLMENSNIQD DCKYREELLH QTREAIIGKY ANLMSRCGNS KFDIRQSVED WRNGRFSDVD
TLINEQALNK DQTQSIIEAR DNLVASLNGL YTNMDSKLAD FDHSRAIQNW WTAVYYGNQL
FQLSEPWLYT KLLKDTAVSD ADKESYRILQ NYFVFLAAET VRITSILITP IVPRLSEKIL
DRLSVASGAR NSEYCEVGAD LQFGVGANSK SHRLPIEKVA LRGD
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