| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81358 |
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| Symbol | |
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| ID | 4837241 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 2223577 |
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| End bp | 2228239 |
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| Gene Length | 4663 bp |
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| Protein Length | 1407 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640388556 |
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| Product | predicted protein |
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| Protein accession | XP_001383188 |
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| Protein GI | 150864398 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.558576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAA AGACCAAAAC CAAGCAGCAG GAAGAAACGC CTCCTCCAGG CAATGCGAAG
GGTAAGAAAA ACTCCAAATC TAAGGTAGAA GAACCACAGG ATGAAGTCAA GAAACCACTT
AGAGGTTTGG CTATAGGGGA AAACTTTGGA TGGACGGGAA AACTTCCAGT AACCTTATTG
AATGAATATT GCCAAAAACA AAAATGGGGC AAGCCCAGCT TCGATATGGT TAAGAAGGGG
CAGGGATTTG TCTGTTTCTT TCATCTTAAT TCGGTTAATC CGAAGACAAA AGAGCCGATC
TCCATAAAAT TCATACCCAA GTACGAACCA AAACTGACAA CAAATGAAGC TAGGCATATG
TCGGCTACGT ATGTTTTGTA CCGTATTAAT TTCATCAAAA ACATGAAAAT GCTTCTTCCG
AACATTTTCC GAGACTATTG GGTCGAACTC GAAAAGGAAC GACTCGAAGT CTTGAAGAAA
GACAAGTATA AGCATGACTT GGTATACAAT GTCAATCCCT TCCAAGTATA TATAGAGCAG
CAAGAGTTGG TGCAGAAAAA GACTAAACAG GAACTTCTCC GGAAGGAAAA TGAAAGTAAA
ATAAAGAAAC CTTCTATCAG CATAGGCACT ACTGTTGTTT CAGCTAAAGC AAGTACCGCC
ACCTCGAGTA ATCATAGAAA TCAAGGAAAT ACAGGTACAA AGGTCAACAA GATACCACAA
ACTATCAATG TGCCTACATT TCCAAGAAAA GTATGGGGCA ATGCTCCATT CATTGACTTT
CCACCGGAGA TTCGTAGTTC CTTGGAACAG TCAATCCGTA AACATATCAA TTGGATCATT
GATAACGAAC ATCCAATGTC TCAAAATAAA TCCAAGGCCG AGGAAAATCA GAAGTCATTG
CTAGCATTAG GTTTTAGACA AATTCACATC GAAGAAGCTT TCAAGTACAC TTCTTCGTTT
GTAGATTCCT TGGAATGGCT CTTATTCCAT ATTCCTGAAG ATGACCTTCC ACCGCAATTC
ACTAAGACTG AAAAGGATTC TAGTGTCATG CTTAGAGTTT CCAAAGATAT CAAGCTTGAG
TATATGTTGA AACGGTTGTC AGAATCAGGT TTCGATAAAG ATGACGTCTT GACTTCCTTA
GAGGAATGCG AGTTTAACGA AGTGCAAGCT GGCGTCAAAC TCACACGTAC ATTTTTAGAA
TTAGAGTCAG ATCAAGAATT TGAAGCTACA GATTTGGAAG ACTCTCAGAG CTTATGGGAA
CAAGAGCTAG AAGGAATAAA AATGATGGAG TCCAACAAAG TTACCTTTAA TAATTCTGAG
AAAACTATTG TAGATATTCA ACTCAGACCA CATAAGATCG CTGAAGACTT ACTTAATGTT
CGTCTACTCA AAAGCTTGCA ATACCCTTGT GAGCTCCCTG GTATTCAAAT CGTTGTGAAC
AACCCTTCCT TCAAATTAGC GAACTACATC AAGTTGTCAA TTCTCTCTAG TTTGGTACAA
TACATCACCG AAAATGAAAT TCTCGGTGAG TGCATGATTT TCAACATTAT CGAATGGCTC
GAGGAGAACA TTTCTCGAAT TATTGATAAC CCAGGTCCTT TAATTCTGGA AGGAGTAATT
AATAGAGCAA CCCAAAGTAA CAAGAAAAGG ACCATTTCTA CTACTACATC TCAAAACAAA
CAGTCGAGAA TTAAAGTTAA ACTGCCAAAG GAAATAGAAG CAGATAAACT TGCCTACAAG
GCTAAGTTGA CGTCAAAGGA AATGCAGAAG TCTTTGAAAC AGAGAAGTTC CTTACCAGCT
TGGAAAAAGA AAGAACAATT GGTGGACGTT ATTAACTCCA ACAAGGTTAC CTTGGTGACA
GGGGAGACTG GTTCGGGTAA ATCCACTCAA ATCGTGCAAT TTATTCTCGA TGATATGAAC
TCCAGGGGCA ATTTTTCCGG CAAGATTATG TGTACTCAAC CAAGACGTAT TTCTACCCTT
GGTCTTGCTG ATAGAATATC GGAAGAACGT TTGGATAAAG TTGGCGGAGA AACAGGGTAC
ATTATTAGAG GTGAAAATAA AACCAGTAAA GATACCCGAA TATCATTTGT GACTACAGGT
GTTCTTTTGA GAATGTTGCA ATCTTTCCTT GCATCTTCCA GTTCACATCA GACTTCTATT
TTTGATGAGT TAGAATACAT CTTCATTGAT GAAGTTCACG AACGTTCCGT GGATAGTGAT
TTTTTACTCA TCATATTAAA AAAGACCATG AATCGTTTTC CTAACCTTAA GATTGTCCTA
ATGTCTGCAA CCATAAGTGT CGAGATCTTC AAAAACTTTT TCAATACACC TTTAAATCAT
ATTCATATTG AAGGTAGAAC ATTTCCAATT GAAGACTACT ACTTAGATCA AATTATTGAT
GATATCGACT ACACCGTGGA AACTGCAAAT GGAATTGTGA AACCAAGGGC GGATTCTCAT
TACTTTGAGA AGGGAAACAT TAATTTCGAC TTAGTTGCTA GGTTGTGTTT GCACATCGAT
GATAAACTTG ATTCCGAGGG AAATGATGGC TCCATCTTAA TATTCTTACC AGGTATCATG
GAGATTAATC AATGTGTCTC CATTATTGAG AGAGCCTTCT CGAAGAGGGA CAAACCATCT
TGGACGCTCC CATTACACTC AGCATTGTCT TCTATGGAAC AGAAACGAGT CTTTAAGGTA
CCAGCGAAGG GTACAAGAAA GATTGTGGTG TCTACAAACG TTGCAGAAAC TTCGATTACT
ATTCCCGACT GTGTGGTGGT CGTTGATGGA GGTAGATCGA AGACGATGTT CTATGATCCC
GAAAAGAATA CAACTAGATT AATTGAAAAC TGGTGTTCCA AGGCCGAAAT TGGACAGCGG
AGAGGTAGAT CAGGTCGTGT AACCAATGGT AACTGCTACC ATCTTTATAC CAAAGAAATT
GAAACCAAAA TGAGACAACA GGCCGTTCCT GAAATCAAAC GGACAAGACT TGAAAATTTG
TACTTAGTTG TGAAATCCAT GGGCATAAGG AGTGTTGATG AATTCTTGAA CAGTGGTATC
GACGCTCCGG ATCAATCGTC GTTGAAAACT TCGAAGAAAT TCTTAAAAGA AATTGGTGCT
TTGGATGCTG ATACTGAAGA ATTATCGCAC CTCGGTAAGT ATTTATCATA TCTTCCAACG
GATCTCCAGA GTGGTAAATT GCTCATTCTT GGTTGTATAT TTGGATGTTT AGATATATGC
TTGACATTAG CATCTATCAG CTCTACTGGT AATCCTTTTT TCAATCTTGC AGACAAAAGA
GCGGAGATCA AGCAAAAGAG AAGAGAGTTT TCCCAGAACC AAGGAGACTT TGTCGCCATA
GCTAATGCAT ATGCAGAATA CGATAAAATG AAACAAAATG GCGAGAACAC CAAGAAATTC
ATTTCTCTGA ACTACTTGTC ATTTATTACA TTGAATGATA TCTCGTCTAC AAGGGTACAA
TACATTTCTT TACTTAAGGA TCTTGGATTT GTTCCACATG GATACTCACA CAGGAATCGT
AATGTCGATT TTAACTTTCT TAATAGAAAT AACGAAAATT TCGGAGTCAT AAGAGCTATT
ATCACGGCTT CTTTCTATCC TCAGATTGCT AGAGTCCAGC TTCCCGACCC CAAATATGTG
AAGTCGGCAG TGGGATCTGT GGCAGTAGAT CCGGAAGCTT CATTGACCAA GTTCTGGGTC
CGTAATGAAG AATATGTCGA TCTTGTGGAG AGCAACAAAA ACTTGGGAGA TGTATTACCA
GCCAATAGGG CCAGAGTTCA CAACAGTTCT GTTATTTTTG ATGACAATTC TGTTGACGGA
TCACTCAGCG AAAAGATATT AGAACAAGCT ACGGATGAGG AAGGAAATCT CGATTTCGTA
AAGGCAAGAG AATTGTACGA TTTGACTCCG CAGGCACCTA AGGGAGGTAA TCCAATTCTT
AAATCACCAT TTGTGGTGTA CGGAAGATCA CACCAGACTT TTGCATTTTT CTTGAGTGAC
ATCACTCCTA CCAGTACAAT TGCTGCCTTA TTATTTGGAG GTAGCATAGG CTACAATTTG
AGCGACCAAC TTTCGAATGG ACCTACTGGG ATTGTGTTGG ACAATTGGTT GCCAATTCGA
ACGTGGTACA AGAATGGTGT TCTAATCAAA CGACTCAGAA AACTAGTGGA TGGAATGATC
GAAGACAGGT TATCCAGTCC CCATTACGTG AACAGTCAGT CAAAAGATGC CAATGACGAC
ATTCTTGCAG TTGTTGAGCA ATTGTTGGCA CTTTAGAAAT GGCTGCAAAA TCGATTAGAG
AAAACGATAC AAAAACTCCA ACAGAAAAGT ATCAAACCGG AAATACCCAA AACGGAAACC
ATGTCACGAG CGCAAATTAC AGTGCGTATA AAATAGAAGC TTAAGTATTG CTTTTTTGTG
CGCAGAAGAT CTCTTGATAT GTCAGAAATG TCGCGCGACA TTTCGATGGC TGACAAATTG
CGAAATCCAG CCACAGTTAT TCCATCTTGA TTTCAAACTC CAGATTCTTA GTAATAGATA
CAACTGGATC ATTCTTCATA TATTTATAGA GTCAGAACCA CTAGATTGGT GAAATAAGCA
TTTTTTGTAC ATACATTTAA TCTACAGCAT TTGCATTTAA TAT
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| Protein sequence | MAKKTKTKQQ EETPPPGNAK GKKNSKSKVE EPQDEVKKPL RGLAIGENFG WTGKLPVTLL
NEYCQKQKWG KPSFDMVKKG QGFVCFFHLN SVNPKTKEPI SIKFIPKYEP KSTTNEARHM
SATYVLYRIN FIKNMKMLLP NIFRDYWVEL EKERLEVLKK DKYKHDLVYN VNPFQVYIEQ
QELVQKKTKQ ELLRKENESK IKKPSISIGT TVVSAKASTA TSSTKVNKIP QTINVPTFPR
KVWGNAPFID FPPEIRSSLE QSIRKHINWI IDNEHPMSQN KSKAEENQKS LLALGFRQIH
IEEAFKYTSS FVDSLEWLLF HIPEDDLPPQ FTKTEKDSSV MLRVSKDIKL EYMLKRLSES
GFDKDDVLTS LEECEFNEVQ AGVKLTRTFL ELESDQEFEA TDLEDSQSLW EQELEGIKMM
ESNKVTFNNS EKTIVDIQLR PHKIAEDLLN VRLLKSLQYP CELPGIQIVV NNPSFKLANY
IKLSILSSLV QYITENEILG ECMIFNIIEW LEENISRIID NPGPLISEGV INRATQSNKK
RTISTTTSQN KQSRIKVKSP KEIEADKLAY KAKLTSKEMQ KSLKQRSSLP AWKKKEQLVD
VINSNKVTLV TGETGSGKST QIVQFILDDM NSRGNFSGKI MCTQPRRIST LGLADRISEE
RLDKVGGETG YIIRGENKTS KDTRISFVTT GVLLRMLQSF LASSSSHQTS IFDELEYIFI
DEVHERSVDS DFLLIILKKT MNRFPNLKIV LMSATISVEI FKNFFNTPLN HIHIEGRTFP
IEDYYLDQII DDIDYTVETA NGIVKPRADS HYFEKGNINF DLVARLCLHI DDKLDSEGND
GSILIFLPGI MEINQCVSII ERAFSKRDKP SWTLPLHSAL SSMEQKRVFK VPAKGTRKIV
VSTNVAETSI TIPDCVVVVD GGRSKTMFYD PEKNTTRLIE NWCSKAEIGQ RRGRSGRVTN
GNCYHLYTKE IETKMRQQAV PEIKRTRLEN LYLVVKSMGI RSVDEFLNSG IDAPDQSSLK
TSKKFLKEIG ALDADTEELS HLGKYLSYLP TDLQSGKLLI LGCIFGCLDI CLTLASISST
GNPFFNLADK RAEIKQKRRE FSQNQGDFVA IANAYAEYDK MKQNGENTKK FISSNYLSFI
TLNDISSTRV QYISLLKDLG FVPHGYSHRN RNVDFNFLNR NNENFGVIRA IITASFYPQI
ARVQLPDPKY VKSAVGSVAV DPEASLTKFW SNKNLGDVLP ANRARVHNSS VIFDDNSVDG
SLSEKILEQA TDEEGNLDFV KARELYDLTP QAPKGGNPIL KSPFVVYGRS HQTFAFFLSD
ITPTSTIAAL LFGGSIGYNL SDQLSNGPTG IVLDNWLPIR TWYKNGVLIK RLRKLVDGMI
EDRLSSPHYS KDANDDILAV VEQLLAL
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