| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81292 |
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| Symbol | ALP1 |
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| ID | 4837263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 2472247 |
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| End bp | 2473966 |
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| Gene Length | 1720 bp |
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| Protein Length | 491 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388578 |
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| Product | high-affinity permease for basic amino acids |
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| Protein accession | XP_001383228 |
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| Protein GI | 150864422 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.958809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTGATTCTAT AGCTCTCAAA AAGGAAAAGT CCGTATTGTC TCAGGACTTG GAGAGATACT
CCGATAATGA CGTCTCCGAT GACGGCTCTC TGCATGATGT TGTTCAGACC GAACATCTTA
ACAGAGCCTT GAAAGCCCGT ACCATTAATA TGATTACCAT TGCCGGTGTT ATTGGTAGTG
GTCTTTTCTT AGGTACTGGT AGATCTTTGG CTACCGGTGG TCCTCTTTCT CTTTTATTGA
GTTATGCCAT CGTGGGTTTG TTGGTTTTCT TCATGATGCT TTCGTTGGGA GAGATGTCAG
TGCAATTCCC GGTGTCTGGT TCCTTCACCA CTTACGCAAA GAGATTCGGA AGTGACTCGC
TTGGTTTCGC CATTCTCATC AACTACTGGT TCAACGATGC CTGCTCAGTT GCCGGAGACC
TTACTGCTAT GCAACTTATT ATGGCTTACT GGACTGACTT CCACTGGTAT GTCATCTCCC
TTATCTTCTG GGTATTTCTC TTGTTCTTGA ACGTTATCCA TGTAAGAATC TATGGTGAAA
CCGAATATTG GTTGGCTTTG CTTAAAGTTG TCACGATCAT CATCTTCTTC ATTGTTAGTA
TCATTGTTAA TGCTGGTCAC AATAACCAAC ACGAATACAT TGGTTTCAAA TGGTGGAGTC
ACGGTGATGC ACCTTTTGTC GATGGTCTCA AGGGATTCAC TTCTTTGTTT GTGTCAGCTG
CTTTCGCAAT GGGTGGATTG GAATCGGTTT CCCTTACTGC TGGTGAAACT GCCAACCCTA
TTAAGGTCAT TCCAAAGACG ATTAAGGCAA CCTTCTGGCG TATTATTATT TTCTACTTGT
TCACCGCCTT CTTCATTGGA ATGAACATCC CATACGACTA CCCAAATTTG GCTACCAAGA
GTGTTGCCAC TTCTCCATTC ACTCTTGTTT TCCAAATGGT GGGTGCAAAG GCTGGTGGTG
GTTTCATGAA TGCCGTGATC ATGACCTCGT TAGTCTCTGC CGGTAACCAT GCCTTGTTTG
CTGGTTCCAG ATTGGCATTC AACTTGGGTT CCCAAGGTTT CTTTCCTAAG ATCTTTACCA
GACTTAACAG ATACCAAATT CCATACGTCG CTGTCATTTT CACTTGGCTC GCAGGTGGTT
TGTGTTTCGG TTCTTCCTTC ATTGGAGCCG GTACCTTGTG GTCTTGGATT CAAAGTATTG
TTGGTCTCTC CAATTTGATT TCATGGTGGG TTATTGGTGT TATCAGCATT CGTTTCAGAA
GAGGTTTGGC CAAGCAAGGT AGAACGGACG AACTTTTATT CAAGAACTGG TCTTATCCTC
TCGGACCCTA CTTCGTTGTT ATTTTTGGTG GTTTCATTAT CTTGATTCAA GGTTGGTCTA
CGCTCAAGCC CTTCGTTGCT GCTGACTTTT TCCAATCCTA CATCGAATTG GGTGTCTTCC
CAGTCACTTT CATTTTCTGG TGGTTAGTGA AAAAGGGTAA GGACAGATTC GTGAAGCTCG
AAGAGATGGA CTTCGACACC GACAGATACT ATGAAAGCAA GGAAGAGAAG GAAGAAGAAA
GATATGCACT GACCTTAAAA GGATGGCAAA AATTCAGATA CGGTTTTGCT GAAAACTTCT
TATAGTTATG TTACCAAGAA CCACCTAATG AACTTCATGA TTTACATTTA ATTCCACCAT
TTCACTCTAA TATTTATGTA TTAATGCATT TATTTCGTCA
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| Protein sequence | MITIAGVIGS GLFLGTGRSL ATGGPLSLLL SYAIVGLLVF FMMLSLGEMS VQFPVSGSFT
TYAKRFGSDS LGFAILINYW FNDACSVAGD LTAMQLIMAY WTDFHWYVIS LIFWVFLLFL
NVIHVRIYGE TEYWLALLKV VTIIIFFIVS IIVNAGHNNQ HEYIGFKWWS HGDAPFVDGL
KGFTSLFVSA AFAMGGLESV SLTAGETANP IKVIPKTIKA TFWRIIIFYL FTAFFIGMNI
PYDYPNLATK SVATSPFTLV FQMVGAKAGG GFMNAVIMTS LVSAGNHALF AGSRLAFNLG
SQGFFPKIFT RLNRYQIPYV AVIFTWLAGG LCFGSSFIGA GTLWSWIQSI VGLSNLISWW
VIGVISIRFR RGLAKQGRTD ELLFKNWSYP LGPYFVVIFG GFIILIQGWS TLKPFVAADF
FQSYIELGVF PVTFIFWWLV KKGKDRFVKL EEMDFDTDRY YESKEEKEEE RYASTLKGWQ
KFRYGFAENF L
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