| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_75790 |
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| Symbol | |
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| ID | 4837069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 2012155 |
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| End bp | 2014220 |
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| Gene Length | 2066 bp |
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| Protein Length | 640 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640388384 |
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| Product | predicted protein |
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| Protein accession | XP_001382615 |
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| Protein GI | 126132180 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1084] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.113893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.814262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGATACCTTG CCGGATCCGT TTGTTTAGCA AAGAGCATCA GCCTTTACGT TACCAAGGTC
CCATCTATTA CACCGTATTT TAATCTCACA AAATGCAACT CTCCTGGAAG GATATCCCCA
CGGTTCCCAC GTCCAACGAT ATGTTGGACA TTGTTCTTAA CAGAACACAG AGAAAGACGC
CAACTGTGAT CAGACCAGGC TTCAAAATTA CCAGAATCCG AGCCTTTTAT ATGCGTAAGG
TCAAGTTTAC TTCTGAAGGT TTTGGCGAAA AGTTCAACGA CATCATCTCT GGCTTTCCCA
ACATTAACGA TGTCCATCCT TTCCACAGAG ACTTGATGGA TACCCTTTAT GAAAAGAATC
ACTACAAAAT CTCGTTGGCT GCTGTTTCCA GAGCCAAGAC ACTCATCGAG CAGGTTGCAA
GAGACTATGT CCGTTTGTTG AAATTTGGTC AGTCGTTGTA CCAATGTAAG CAGTTGAAAC
GTGCTGCACT CGGTAGAATG GCTACGATCA CCAAGAAGTT GAAGGATCCT TTGGTATATT
TGGAACAAGT AAGACAACAT TTGGGAAGAT TGCCCTCTAT CGACCCTAAT ACGAGAACCC
TTTTGATCTG TGGTTACCCT AACGTTGGTA AGTCTTCTTT CTTGCGTTGT ATCACCAAGG
CAGATGTTGA AGTCCAGCCT TATGCCTTTA CCACTAAGTC GCTTTACGTA GGTCATTTCG
ACTACAAGTA TTTGAGATTC CAAGCTATCG ACACTCCTGG TATTTTGGAC AGACCTACCG
AAGAAATGAA CAACATTGAA ATGCAATCCA TTTATGCTAT TGCCCACTTG AGATCATGTG
TATTGTACTT CATGGATCTT TCCGAGCAGT GTGGCTTCTC TATTGAAGCC CAAGTAAAGT
TGTTTCATTC GATTAAGCCT TTGTTTGCCA ACAAATCTGT GATGGTTGTG ATGAACAAGA
GTGATATCAT CAAGGCTGAA GACTTGTCAG AATCCAACCA GGAATTGTTG AAGTCTTTAA
CTACTGTTCC TGGTGTTGAA GTAATGCATG CTTCGTGTCA CGAAGAAGAA AACGTTATGC
AAGTGAGAAA CCAGGCCTGT GAGAAGTTGT TGACGGCCAG AATTGAACAG AAATTGAAGG
GAACCGCTCG TGTGAATAAC GTCTTGAACA AGATCCATGT GGCCAGACCT CAGGCCAGAG
ACGATGTAGA CAGAGCAGCT TTCATTCCAG ACGCTGTTAA GGCTTTGGAT AAGTACGACG
TAAACGATCC TAACAGAAGA AGATTGGCCA GAGACATTGA AAGTGAGAAT GGAGGTGCCG
GTGTGTTCAA TATCAACTTG AAGGACAAGT ACCTTTTGGA AGACGATGAC TGGAAGAACG
ATATCATGCC TGAAGTGTTG GACGGTAAGA ATGTCTACGA CTTCTTGGAT CCAGACATCG
CTGCCAAGTT GCAAGCTTTG GAAGACGAAG AAGAAAGATT AGAACAGGAA GGTTTCTACG
ACTCGGACTC GGAAGTTGAA GACGAAGGTG TTGACGAAAT CAGAGAAAAA GCACAATGGA
TTAGAGACAA GCAGAAGAAG ATGATTGTTG AAGCCAGAAA CAGAAAGTCG TTGAAGAACA
AGGCTATCAT GCCCCGTGAT CAAGTTAAGA AGTCGTTTGG TGAGATGGAA GAGCACATGT
ACTCATTGGG TCACGATACC GAAGCTTTGA GAGAAAGAGT CGGAAAGAGA TCCCAAGCCA
AGGAGTTGTC TGGTGTTGAC ATCTTGAGAA AGAACCAGGG TGTCCAGACT GCTAGACTCA
GCAAGAAGAA GGCTGCTGCC AACCAAACTG ATCGTCTTAA TGACGGTGTC AACGACGGTG
CGCTCAGATC GCAAGCAGAA AGATTGGCCA AGATACAGAG AAGAGAAAGA AACAGACAAG
CCAGACAAGG TGAAGGTGAC CGTCACGCTA CAGCATCCAT TCCAAAGCAT TTGTTTTCCG
GTAAGAGGGG TATTGGATCT TCCGACAGAA GATAGTCAAA GTCCGCATTG TGCAATAGGT
TTATATTTTA ATACAGCATT GATTAG
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| Protein sequence | MQLSWKDIPT VPTSNDMLDI VLNRTQRKTP TVIRPGFKIT RIRAFYMRKV KFTSEGFGEK
FNDIISGFPN INDVHPFHRD LMDTLYEKNH YKISLAAVSR AKTLIEQVAR DYVRLLKFGQ
SLYQCKQLKR AALGRMATIT KKLKDPLVYL EQVRQHLGRL PSIDPNTRTL LICGYPNVGK
SSFLRCITKA DVEVQPYAFT TKSLYVGHFD YKYLRFQAID TPGILDRPTE EMNNIEMQSI
YAIAHLRSCV LYFMDLSEQC GFSIEAQVKL FHSIKPLFAN KSVMVVMNKS DIIKAEDLSE
SNQELLKSLT TVPGVEVMHA SCHEEENVMQ VRNQACEKLL TARIEQKLKG TARVNNVLNK
IHVARPQARD DVDRAAFIPD AVKALDKYDV NDPNRRRLAR DIESENGGAG VFNINLKDKY
LLEDDDWKND IMPEVLDGKN VYDFLDPDIA AKLQALEDEE ERLEQEGFYD SDSEVEDEGV
DEIREKAQWI RDKQKKMIVE ARNRKSLKNK AIMPRDQVKK SFGEMEEHMY SLGHDTEALR
ERVGKRSQAK ELSGVDILRK NQGVQTARLS KKKAAANQTD RLNDGVNDGA LRSQAERLAK
IQRRERNRQA RQGEGDRHAT ASIPKHLFSG KRGIGSSDRR
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