| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_70510 |
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| Symbol | |
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| ID | 4837299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1531699 |
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| End bp | 1536408 |
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| Gene Length | 4710 bp |
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| Protein Length | 1549 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640388614 |
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| Product | predicted protein |
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| Protein accession | XP_001382516 |
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| Protein GI | 150863886 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0352779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAC TCGACTTGCT ATCTGTGGAC GCGTCTCACG CTCCTAATGG TTGGAGTCTT
CTCAGCAATT TGCCTATGGT GTATGGAAAT TTCGTAGAAA TGGGCAAATC TGGCCACCAC
AAGGGTGTTC ATAATGGAAC TTCTTCGGCA AAGAACGACT CGTGGTTACT GTGTAACACG
CAAAGTGACG GCTGGGGGCC CTTGTCGTCC GAATACAACG ATATAACGCC GTGTTTCCTA
CAAGGTGTGC TCTTTGGGCT TTCTGCTATT CTTATGATAG CAGTAGGTCT GTATCAAGTT
TACAGTCTCA GAAAGAGAAA GATATCTGTT TCCAACAGAA AGTCATGGTC ATTTTACACC
AAGTTGCTCT TGGTCGTATT TCAATTGGTG TTGCAAGTGG CATTGGTGGG TCTCTATGGG
GACGTCGGTA TCATCAAAAC GTCTCTCGTA CTCAATGCTA TCGCAACTGT AGTAGCATTT
GCTATTCATT ACATAGAACA GTACAAGCTG ACAATTCCAA ATGGCGTATT GTTATTTTAC
TGGTTGTTTC AGATCATATT AAACCTTGGA CGTATAGTCA ACAGCCATTT GCGTAATGAG
AGCCATACCC AGTTCGCAGT AGTAGTCATT TTGTCCACTG TCAATTCTCT TTTCATTCTT
GTCATAGAGG TCGTTTTTAC AATGCAGCCG TTGACCAGCT ACACCAAATT AATCCGTGAA
TCACCATATG ATACTGCTAA TGTCTTTTCC AGAATCACAT TCGACTGGAT GGGTGCTTTG
ATGAAGAGAG GCTACGAGAA GTTCTTGACC GAACGCGACT TGCCTCCTTT GCCAGTAGAA
TTGAAGGCCT CTGCCACATC TAATCGATTC GGCAACTTTT GGGAGGGCCA ATCGAAACCA
TCGTTGTTTT TGGCTATTGC AAAAGCCTTT GGTGCTGAAT TTATGCTTGG TGGAGTCTTT
AAAGGTTTGC AAGATGCCTT GGCTTTTGTG CAACCACAAT TGTTGAGGTT GTTGATCAAG
TTCGTCAATG ACTATTCCGA GTCGCAGAAG GCTGGTTCTC CTATTCCGTT AACCAAAGGT
TTATTGATAG CTGTGTCGAT GTTCGTCGTC TCTGTGGTTC AGACTGCATG TTTGCACCAG
TATTTTCAAA GAGCCTTTGA CACAGGTATG AAGATCAAAT CGTCTTTGAC TTCAGTTATC
TACAATAAAG CTTTAGTCTT GTCTAATGAA ACTAAGCAAG AGTCATCTAC TGGTGACATT
GTCAATTTAA TGTCTGTCGA TGTACAAAGA TTACAAGATT TGGTACAGAA CTTGCAAATC
ATCTGGTCTG GTCCATTTCA AATTTTCTTG TGTTTGTATT CGTTGCATGG TTTGATCGGT
AATTCGATGT GGGCTGGTGT AGCAATTATG GTAGTCATGA TTCCTTTGAA TGCGGTCATT
GCAAGAATCC AAAAGAGTCT TCAAAAGACC CAGATGAAGA ACAAAGATGA GAGATCGAGA
TTGATCAATG AAATCTTGAA CAATATCAAG TCGTTAAAGT TATACGGTTG GGAACAACCT
TATTTGCAGA GATTGAACCA CGTTAGAAAT GAGAAGGAAT TAAAGAACTT GAAGAAGATG
GGAATTTTCA GTGCCTTCTC CAACTTCACG TGGACTTTGG CTCCTTTCTT GGTCAGTTGC
TCTACTTTTG CTGTTTTTGT CTTGACGGAA AAGAATAGGA GTTTGTCTAC AGACTTGGTT
TTCCCAGCCT TGTCATTATT CAACCTCTTG TCTTTCCCTC TTGCTGTAGT TCCCATGGTT
ATCACTAACA TTGTAGAAGC CCAGGTAGCT GTTTCCAGAT TGACTAAGTT CTTAACTGGT
ACTGAATTAC AAGAGGATGC AGTTATCAAG GCTCCCAGAG TCAGTAAGAT TGGTGAAACT
GCTGTATCCA TTTCCAATGG TACTTTCTTG TGGTCAAAGG CTAAAGGTGA TCTGAACTAC
AAAGTTGCAC TTTCCAATAT CAACTTGTCT GCTAAGAAGG GCCATTTGGA TTGTATTGTA
GGGAAGGTTG GTTCAGGTAA GTCTTCCATC ATTCAGGCTG TTCTTGGTGA CTTGTACAAG
CTTGATGGTG AGGTGAGAAT TCATGGTAAG ACTGCCTATG TCTCTCAAGT ACCGTGGATT
ATGAACGGAA CTGTTCGTGA CAACATTCTT TTCGGCCACA AGTACGATGC TGAATTCTAT
CAACATGTCT TGAAGGCTTG TGCTTTGACT GTGGACCTCA GCATATTGCC TAAGGGAGAT
AGTACTGAAG TAGGTGAAAA GGGTATTTCT CTTTCTGGTG GTCAGAAGGC TAGATTGTCA
TTGGCTAGAG CTGTATACGC TAGAGCTGAT GTTTACTTGT TGGACGATCC TTTGAGTGCT
GTAGATGAAC ATGTCGGTAA GCATTTGACC GATCATGTTT TGGGTCCAAA TGGTTTGTTG
AAGACGAAGT GTAAAATTTT GGCAACCAAC TCCATCAAGG TGTTGAGTAT TGCTGACAAC
ATTCACTTGG TCAGTGATGG AAGAGTTGTT GAACAAGGTA CTTACGACGA TATATTCAAG
CAGGAAAATA GTAAGATTCG TCAATTGATC GAAGAATTTG GTAAGAAGAA AGACAGTGGA
ACCAGTACTC CTACTAAAGA AATTAAAGAC GAAGAAGATG AAGAACCTAA GGACAATGTG
GATTTGGCCA ACTTGGATTC GGACTCTGAT TACGAAGTGG GCAGTTTGAG AAGAGCCTCA
GATGCTTCTC TATTGGCCGA GGATGAAGTT GGCTTGTCGG ACCAAGAAGA GGATGAAGAT
GAGGAATCTA AGGCTAGAAA GGAACACCTT GAACAAGGTC AAGTCAAGTG GGAAGTCTAC
AAGGAATACG CCAATGCCTG TAACCCAGTT AACGTTGCCA TTTTCTTGTT TACTGCGTTC
TTGTGTTTGT CTATTAATGT TGCTTCTAAC GTCTGGTTAA AACACTGGTC TGAAGTGAAC
ACTAAGTACG GATACAACCC CAACGTTGGT AAGTACTTAG GTATCTACTT TTTGTTGGGT
ATTGGATTTT CTGTATCTTC CTTGATTCAA AACTCGTTCT TATGGATCTT CTGTACCATT
CAAGGATCTA AGAAGTTACA CAATCAGATG GCTGTTAGCG TCTTGAGAGC TCCAATGTCG
TTCTTTGAGA CTACACCAAT TGGTAGAATC TTGAACAGAT TCTCCAATGA TGTTTACAAG
GTCGACGAAA TCTTGGGCAG AGTGTTCAGT ATGTTCTTCA GCAACTCGAT TAAGGTTCTT
CTCACTATCG TAGTTATCAT TTTCTCCACC TGGCAGTTCG TTTTCCTTGT ATTACCTCTT
GGTATTTTGT ACGTTTACTA CCAACAGTAT TACTTGAGAA CTTCCAGAGA ATTGAGAAGA
TTGGACTCTG TTTCAAGATC GCCAATCTTT GCCAACTTCC AGGAATCGTT AACTGGTGTA
TCTATCATTA GAGCATATGG TCAAGAAGAA AGATTCAAGT TCTTGAACGA GAACAGGGTT
GATAAGAATA TGAGTGCTTA CCATCCTGCT ATCAATGCTA ACAGATGGTT GGCAGTCAGA
TTGGAATTCT TGGGATCAGT TATCATTTTG GGTGCTGCTG GTTTGTCGAT TTTGACGTTG
AAATCTGGAC GTTTGACTGC TGGTTTAGTT GGTTTGTCTG TTTCTTACGC TCTTCAAATT
ACCCAGTCAT TAAACTGGAT TGTTAGAATG ACTGTTGAAG TCGAAACCAA TATTGTGTCT
GTTGAAAGAA TTATGGAATA CTCGAGATTA ACTCCAGAAG CTCCAGAGAT TATCGAGGAC
CACAGACCTG CTGCCAACTG GCCAACCCAG GGTGAAATCA AATTCGAAAA TTTCTCTGCC
AAATACAGAC CGGAATTAGA TTTGGTGTTG AAGAATATTA ATTTGCATAT CAAGCCAAGA
GAAAAGGTTG GTATTGTAGG TAGAACTGGT GCCGGTAAGT CTTCAATCAC TTTGTCATTG
TTCAGAATCA TTGAAGCATT TACAGGTGAT ATCGATATTG ATTCTGTCAA TACCGGGTCT
ATTGGTTTGG CTGACTTGAG ACACAAATTA TCCATCATTC CACAAGATTC GCAAGTCTTC
GAAGGAACCA TCAAGTCCAA CTTGGATCCT ACCAATGAAT ACAACGATGA ACAGATTTGG
AAAGCTCTTG AATTATCTCA TTTGAAAGAT CACGTCTTGA AGATGTATGA ACAGAGAGAT
AAGGATCAAG AATTAGAATC TGCATTGGAT GTAAAGTTGA GTGAAGGTGG TGCCAATTTG
TCTATTGGAC AGAAGCAGTT GATGTGCTTA GGCAGAGTTC TTTTGAAGAT GAGTGCTTCA
AACATTTTGG TTTTAGATGA AGCTACTGCT GCTGTCGATG TAGAGACTGA CCAGATTCTT
CAACAAACTA TCAGATCTGA GTTCAAGGAC AAAACAATTA TTACCATTGC TCATAGATTA
AACACTATCT TGGACTCTGA CAGAATTATT GTGTTGGAGA AAGGTGAAGT AGCTGAATTT
GATACCCCAG CTAACTTATT GAAGAAGAAG GATTCTTTAT TCTACTCCTT GTGTAAACAG
GGTGGTTTTG TCGAAGACAA CGATGAGTAG TCGACTTATC AGTATAGACC TGTACATTTT
AGTAACTCTA ATACAAAAAA AATTTCTATC
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| Protein sequence | MEQLDLLSVD ASHAPNGWSL LSNLPMVYGN FVEMGKSGHH KGVHNGTSSA KNDSWLSCNT
QSDGWGPLSS EYNDITPCFL QGVLFGLSAI LMIAVGSYQV YSLRKRKISV SNRKSWSFYT
KLLLVVFQLV LQVALVGLYG DVGIIKTSLV LNAIATVVAF AIHYIEQYKS TIPNGVLLFY
WLFQIILNLG RIVNSHLRNE SHTQFAVVVI LSTVNSLFIL VIEVVFTMQP LTSYTKLIRE
SPYDTANVFS RITFDWMGAL MKRGYEKFLT ERDLPPLPVE LKASATSNRF GNFWEGQSKP
SLFLAIAKAF GAEFMLGGVF KGLQDALAFV QPQLLRLLIK FVNDYSESQK AGSPIPLTKG
LLIAVSMFVV SVVQTACLHQ YFQRAFDTGM KIKSSLTSVI YNKALVLSNE TKQESSTGDI
VNLMSVDVQR LQDLVQNLQI IWSGPFQIFL CLYSLHGLIG NSMWAGVAIM VVMIPLNAVI
ARIQKSLQKT QMKNKDERSR LINEILNNIK SLKLYGWEQP YLQRLNHVRN EKELKNLKKM
GIFSAFSNFT WTLAPFLVSC STFAVFVLTE KNRSLSTDLV FPALSLFNLL SFPLAVVPMV
ITNIVEAQVA VSRLTKFLTG TELQEDAVIK APRVSKIGET AVSISNGTFL WSKAKGDSNY
KVALSNINLS AKKGHLDCIV GKVGSGKSSI IQAVLGDLYK LDGEVRIHGK TAYVSQVPWI
MNGTVRDNIL FGHKYDAEFY QHVLKACALT VDLSILPKGD STEVGEKGIS LSGGQKARLS
LARAVYARAD VYLLDDPLSA VDEHVGKHLT DHVLGPNGLL KTKCKILATN SIKVLSIADN
IHLVSDGRVV EQGTYDDIFK QENSKIRQLI EEFGKKKDSG TSTPTKEIKD EEDEEPKDNV
DLANLDSDSD YEVGSLRRAS DASLLAEDEV GLSDQEEDED EESKARKEHL EQGQVKWEVY
KEYANACNPV NVAIFLFTAF LCLSINVASN VWLKHWSEVN TKYGYNPNVG KYLGIYFLLG
IGFSVSSLIQ NSFLWIFCTI QGSKKLHNQM AVSVLRAPMS FFETTPIGRI LNRFSNDVYK
VDEILGRVFS MFFSNSIKVL LTIVVIIFST WQFVFLVLPL GILYVYYQQY YLRTSRELRR
LDSVSRSPIF ANFQESLTGV SIIRAYGQEE RFKFLNENRV DKNMSAYHPA INANRWLAVR
LEFLGSVIIL GAAGLSILTL KSGRLTAGLV GLSVSYALQI TQSLNWIVRM TVEVETNIVS
VERIMEYSRL TPEAPEIIED HRPAANWPTQ GEIKFENFSA KYRPELDLVL KNINLHIKPR
EKVGIVGRTG AGKSSITLSL FRIIEAFTGD IDIDSVNTGS IGLADLRHKL SIIPQDSQVF
EGTIKSNLDP TNEYNDEQIW KALELSHLKD HVLKMYEQRD KDQELESALD VKLSEGGANL
SIGQKQLMCL GRVLLKMSAS NILVLDEATA AVDVETDQIL QQTIRSEFKD KTIITIAHRL
NTILDSDRII VLEKGEVAEF DTPANLLKKK DSLFYSLCKQ GGFVEDNDE
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