Gene PICST_70083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_70083 
SymbolMNN2 
ID4837257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1666645 
End bp1668601 
Gene Length1957 bp 
Protein Length559 aa 
Translation table12 
GC content36% 
IMG OID640388572 
Producttype II Golgi membrane protein 
Protein accessionXP_001382551 
Protein GI126132052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGATTACCAA AAGCCAAAAC AAGGTTGGCT ATCACGATCT TTATATTGAT ATTTCTATTC 
ATAACAGCCA GATTTTCCTC ACACAAACGG TATGATGTCA AAGTAATGCA AGATAATGAA
GTTATGGTAG GTGATATAGA GCGATTGTAC CAAGAGCAGC AGATACACGA ATTGAAGCTC
AACGACGTCG ATATTCCAAT TAGTCCGGAA GAATCTCATC TACAAGAGAA AAGCAAGAAT
GTATTACTTT CTCAAGCATT TTGGAACAAG ATATTTACAA TTATTTCTGA AGCTAAGGTG
AACATAACAA AGGATGATCT TCCCAAAGCT GTCAAGTTTC TCGCCAAGTC TGAGCAGAAA
GAAGGTCCCA ACACAAAGGA AGTATTACTT TCCAAAGCTG AAATATCAGA CGACGTTTTT
AAGGAATTTA AAGATAAACA CGATCAATTT TTAGATGTGT TACCTTTGAA GATATCGGAA
AGTGCTTACA AGAAAGGAAC TAGAGGGGTT GTTATGGTGG GTGGAGGTCG GTTTTCATGG
CTATCCTATC TATCGTTGAT AGCCCTACGT GAGACAGGAT CACAGCTTCC AGTTGAGATT
GTAATGCCAA AACTTCAAGA TTACGAGAGA GAATTGGAGT TTTGCAATAC AATTTTACCA
AAATTGAAAG CAACTTGCGT TGTTCTACAT GAGACTTTGG GCGATGAAAT CATGGAAAAA
TGGTCATCAA ACTTTGCTAA CTATCAATTC AAATCGTTGT CCCTACTCAT GTCATCTTTT
GAGCAGGTTC TTTTGTTAGA CTCCGATAAC ATCATTCTCT CTAACCCTGA TTCAATCTTT
GAAACCAAGT TATTCAAATA CTATGGTATG ATTACCTGGC CAGATTATTG GAAAAGAACT
ATATCTCCCA AATATTATCA GATTGCTGGA ATCGATGTGA ACGAGAGAAA GAGGGTTAGA
TTCAATCGTT TTCCATTGAA TGTAGCTACA TCTCCCGGAG AGAATGTTGA CCATGAAGAT
ATGAACAACG TTCCATTCCA TGACTTAGAA GGAGCAATGC CAGATTTGTC TACAGAATCT
GGTCAATTGA TAATTGATAA GTCTAGCCAC GGGAGAACGC TATTGTTGGC ATTATACTAC
AATATGTATG GACCCCGGTT GTACTATAAA TTATTCTCCT TAGGAGAACA AGGTGAGGGC
GATAAGGATA CCTTTGTAGC AGCTGCAACC GTCACACATC AAAAATTTTA TCAGGTTAAA
TCTTTCATTC AAACATTTGG CTATCTTGAT TCCGAGGGAA GATTTCAAGG AGTTGCTATG
GGTCAAAAGG ACCCACTTAC AGATTATGAC AAGTTCCAAG ATAAAGCATT GAAACCTATA
TTTAACGAAG AGAGCAACCC AAAATCTATT CCTGAGCAGA TAGACATACT TCAGGGCGTT
ATGGACAACG ATTTTAGCGA CAACAATGGA GTTCCAATAT TTGCAATTCA TTGCAACTAT
CCAAAGCTAG ACCCATTACA ACTACTTGAT AGGGATGATC TCTTCGATAA GGAAAAAAAC
CGTTTGAGGT ATAGGTTATA CGGTTCAATG AGTTATAAGA AATTCATAAC TACCAGTAGT
GGAGAGAGAA AGCTTGCAAA AATAGATTTT GAACATGAAC AGTGGACGCA CATGCGGTCT
ATTTTATGTG AAGAAAAATT ACACTTCGTC CATTTTGACA AACACAATAT GGACGACATA
TGTAAATTTA TTAACAACCA AGTTGAATTT TTAACAGCTG AGTAATTAAG AAAGACTGTG
TATCAATTTC ATACTCAGTA TTGAGAAAAA ACATATGCTT AACTTGACAT ATAAGGGTGA
AATGTAATAA TTATGGCAAT ATTTTGACTG TCCAATACAT TAAGCTTCAC CAGAAAATTA
GAGTACTTTC TATATAACTT AACCATAAGC TTTTTAT
 
Protein sequence
MQDNEVMVGD IERLYQEQQI HELKLNDVDI PISPEESHLQ EKSKNVLLSQ AFWNKIFTII 
SEAKVNITKD DLPKAVKFLA KSEQKEGPNT KEVLLSKAEI SDDVFKEFKD KHDQFLDVLP
LKISESAYKK GTRGVVMVGG GRFSWLSYLS LIALRETGSQ LPVEIVMPKL QDYERELEFC
NTILPKLKAT CVVLHETLGD EIMEKWSSNF ANYQFKSLSL LMSSFEQVLL LDSDNIILSN
PDSIFETKLF KYYGMITWPD YWKRTISPKY YQIAGIDVNE RKRVRFNRFP LNVATSPGEN
VDHEDMNNVP FHDLEGAMPD LSTESGQLII DKSSHGRTLL LALYYNMYGP RLYYKLFSLG
EQGEGDKDTF VAAATVTHQK FYQVKSFIQT FGYLDSEGRF QGVAMGQKDP LTDYDKFQDK
ALKPIFNEES NPKSIPEQID ILQGVMDNDF SDNNGVPIFA IHCNYPKLDP LQLLDRDDLF
DKEKNRLRYR LYGSMSYKKF ITTSSGERKL AKIDFEHEQW THMRSILCEE KLHFVHFDKH
NMDDICKFIN NQVEFLTAE