| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68558 |
|---|
| Symbol | ADH1 |
|---|
| ID | 4836752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 786793 |
|---|
| End bp | 788537 |
|---|
| Gene Length | 1745 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640388067 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | XP_001382922 |
|---|
| Protein GI | 126132794 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.02064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.599595 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GATCCGAGGG AAAAACCGGG GACTCAGTTT ATCACGTACC GAGAAATTCT TCGTTTCAGC
ATCATCACCA TGTTGTCCAA TTACAGCCCG AAGCACAGTC TAATGCTGAA TTTTGATAGA
GCTCATCGTG AACAGCCAGA TTCGAAGAAA GGGGGGATGA GATCCGGGTT CATCTGCAAG
AGACACAGAA AATAAAAAAC ATACGATCCG TTCAGCTACC TGGCGCTTAA CCAGGAAAAT
CACTGCTGGA GTGGCCAGCA TGTCACGAGG TGGCAGAATC CGATAATGTG TGATTGCGTG
TAGCATCGGC GCAAGTCGAA TTTCGGTCAT ATTCCGTGTC TGGATATTAT TCCACTATTT
TTTAATTTTT CAGGTTGGAT GCGATTGTTC CCTTTACGTC TGGACGATGC CTGAAGCCCC
AGGTATATAT AAGGGGCTCG AAAGTCCTTT GACCAGCTGG TTGATTTGAC TTTGTTTGTT
CCTTTCTTTC TTTCATCTAC TCATCACTCA ATTGCATTCG CAATTTCCCA TTAATACATA
TTTCACTTGC TCCACATATT GCACCCAATT GCATAAGTGC TGCGATCCAT CCAAATTATC
ATGTCTGTTC CTACCACTCA AAAGGCTGTT GTCTTTGAAT CCAACGGAGG TCCATTGCTC
TACAAGGACA TTCCCGTGCC CACTCCTAAG CCCAACGAAA TCTTGATCAA CGTCAAGTAC
TCCGGTGTCT GTCACACTGA CTTGCACGCT TGGAAGGGAG ACTGGCCATT GGACACTAAG
TTGCCATTGG TTGGTGGCCA CGAAGGTGCT GGTGTTGTTG TCGGAATTGG TTCCAACGTC
ACGGGCTGGG AACTCGGTGA CTACGCTGGT ATCAAGTGGT TGAACGGTTC TTGTTTGAAC
TGTGAATTCT GCCAGCACTC CGACGAGCCA AACTGTGCTA AAGCCGATTT ATCTGGTTAC
ACACATGACG GTTCATTCCA ACAATACGCT ACTGCTGATG CCGTACAGGC TGCCAGACTC
CCCAAGGGTA CTGACTTGGC CCAGGCTGCT CCTATCTTAT GTGCTGGTAT CACCGTCTAC
AAGGCTTTGA AGACCGCTCA AATCCAACCA GGTAACTGGG TATGTATTTC CGGTGCTGGT
GGTGGATTGG GTTCTCTTGC TATCCAATAT GCCAAGGCCA TGGGTTTCAG AGTCATTGCA
ATTGACGGTG GTGAAGAAAA GGGTGAATTT GTCAAGTCAT TGGGTGCCGA AGCCTACGTG
GACTTCACTG TCTCCAAGGA CATTGTCAAG GACATCCAGA CTGCCACTGA CGGTGGCCCA
CATGCTGCCA TCAATGTATC TGTCTCTGAA AAGGCCATTG CCCAATCCTG TCAATACGTC
AGATCCACCG GTACCGTAGT GTTGGTTGGT TTACCAGCCG GTGCCAAGGT TGTTGCTCCA
GTGTTCGATG CCGTTGTCAA GTCCATCTCC ATCAGAGGTT CTTATGTCGG TAACAGAGCT
GACTCTGCTG AAGCCATTGA CTTCTTCACA AGAGGCTTGA TCAAGTGTCC TATCAAGGTC
GTCGGCTTGT CGGAATTACC TAAGGTCTAC GAGTTGATGG AAGCCGGAAA GGTCATTGGT
AGATACGTTG TTGACACCTC CAAGTAAACA AGCCGTGCTA GATAGTGCTT TGTTCTATTC
CACCTCGTGT TTTATTTACC TTTTAACTAG TGCTAATTTA CGAATAATGT ACGTTAGAAA
AATTG
|
|---|
| Protein sequence | MSVPTTQKAV VFESNGGPLL YKDIPVPTPK PNEILINVKY SGVCHTDLHA WKGDWPLDTK
LPLVGGHEGA GVVVGIGSNV TGWELGDYAG IKWLNGSCLN CEFCQHSDEP NCAKADLSGY
THDGSFQQYA TADAVQAARL PKGTDLAQAA PILCAGITVY KALKTAQIQP GNWVCISGAG
GGLGSLAIQY AKAMGFRVIA IDGGEEKGEF VKSLGAEAYV DFTVSKDIVK DIQTATDGGP
HAAINVSVSE KAIAQSCQYV RSTGTVVLVG LPAGAKVVAP VFDAVVKSIS IRGSYVGNRA
DSAEAIDFFT RGLIKCPIKV VGLSELPKVY ELMEAGKVIG RYVVDTSK
|
|---|
| |