| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_67105 |
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| Symbol | TKT1 |
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| ID | 4837370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 2390875 |
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| End bp | 2393469 |
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| Gene Length | 2595 bp |
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| Protein Length | 677 aa |
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| Translation table | 12 |
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| GC content | 48% |
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| IMG OID | 640388685 |
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| Product | transketolase 1 |
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| Protein accession | XP_001382685 |
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| Protein GI | 126132320 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TGGCGAGATC CGGGTCGAGG GACGAGCGAC CGGAGCGGCA CCACCTACCG TTCGGAAGTG
AGCATAGATG CTAATGATTC GCTTACACAG AAGTACCAGA GTTCATGCTA CTCAAACCAA
CTACTCCACT TAAGCTATGA TTGGTATGCA CGTGAGTTGT ATACTTAATC AGGTCGGCCC
CACCCTCGCC CCCAGGTCGG TGAAAAATTT TAGTGCGTGC CAACATATTT CATTATTACT
ACTGAATCGC TGCAGTTGAT AAACCCCCAC GGTTGGAAAT TGTCCACTGC TGCGTCTGAA
AAATATATAT AGGAATTGGA ATTTCCAGCC CACAACAAAA TTTGGCAGTT CTTCTTTTCC
TTCTCTTCTC TCTTTCTGGT CCAGTGGAAT TCCTTACTAT TCCTATCGCT TTTGTATCTT
CAATTGCCAC CAGACTTCCA TTTGCCATGT CGTCCGTCGA TCAAAAAGCT ATCAGCACCA
TCCGTCTTTT GGCTGTGGAT GCCGTCGCTG CTGCCAACTC CGGTCACCCA GGTGCTCCAT
TGGGTTTGGC TCCAGCTGCC CACGCCGTAT TCAAGAAGAT GAGATTCAAC CCTAAGGATA
CCAAGTGGAT CAACAGAGAC AGATTCGTCT TGTCCAACGG TCACGCCTGT GCCTTGTTGT
ACTCGATGTT GGTTCTCTAC GGCTACGACT TAACCGTCGA AGACTTGAAG AAGTTCAGAC
AATTGGGCTC CAAGACCCCT GGTCACCCAG AAAACACCGA TGTTCCAGGT GCTGAAGTCA
CTACCGGTCC ATTAGGTCAA GGTATCTGTA ACGGTGTTGG TATTGCCCTT GCCCAAGCTC
AATTCGCTGC CACCTACAAC AAGCCAGACT TCCCTATCTC CGACTCGTAC ACCTACGTCT
TCTTGGGTGA CGGTTGTTTG ATGGAAGGTG TTTCTTCGGA AGCCTCTTCT CTTGCTGGTC
ACTTGCAATT GGGTAATTTG ATTGCCTTCT GGGACGACAA CAAGATCTCC ATTGACGGTT
CTACTGAAGT TGCATTCACC GAAGACGTTA TCGCCAGATA CAAGTCGTAC GGATGGCACA
TTGTTGAAGT CAGCGATGCA GACACCGATA TCACTGCCAT TGCTGCTGCC ATCGACGAAG
CCAAGAAGGT TACCAATAAG CCAACTTTGG TTAGATTGAC TACCACCATC GGTTTCGGTT
CGCTTGCTCA AGGTACTCAT GGTGTCCACG GTGCTCCATT GAAGGCTGAT GACATCAAGC
AATTGAAGAC TAAGTGGGGC TTCAACCCAG AAGAATCCTT CGCTGTTCCA GCTGAAGTTA
CTGCTTCCTA CAACGAGCAC GTTGCTGAAA ACCAGAAGAT TCAACAACAA TGGAACGAAT
TGTTCGCTGC CTACAAGCAA AAGTACCCAG AATTGGGTGC TGAGCTCCAA CGTCGTTTGG
ACGGTAAGTT GCCAGAAAAC TGGGACAAAG CCTTGCCAGT CTACACCCCA GCCGACGCTG
CCGTTGCTAC CAGAAAGTTG TCTGAAATCG TCTTGTCCAA GATCATTCCA GAAGTGCCAG
AAATCATTGG TGGTTCTGCC GATTTGACTC CTTCCAACTT GACCAAGGCC AAGGGCACTG
TTGACTTCCA GCCTGCCGCT ACTGGCTTGG GTGATTACTC TGGTAGATAC ATCAGATACG
GTGTTAGAGA ACACGCTATG GGTGCTATCA TGAACGGTAT CGCTGCCTTT GGTGCCAACT
ACAAGAACTA CGGTGGTACT TTCTTGAACT TTGTCTCCTA TGCTGCTGGT GCCGTCAGAT
TGTCTGCATT GTCTGAATTC CCAATCACTT GGGTCGCTAC ACACGACTCT ATCGGTTTGG
GTGAAGACGG TCCAACCCAT CAACCTATCG AAACATTGGC TCATTTCAGA GCTACTCCAA
ACATCTCTGT CTGGAGACCA GCTGATGGTA ATGAAACCTC TGCTGCTTAC AAGAGTGCTA
TCGAATCTAC CCACACTCCA CACATTCTTG CCTTGACCAG ACAAAACTTG CCACAATTGG
AAGGATCCAG TATTGAAAAG GCTTCTAAGG GTGGTTACAC TTTGGTCCAA CAAGACAAGG
CTGACATCAT CATCGTTGCT ACTGGTTCCG AAGTGTCTCT TGCTGTCGAT GCCCTCAAGG
TCTTAGAAGG CCAAGGCATC AAGGCTGGTG TCGTCTCCTT GCCAGATCAA TTGACCTTCG
ACAAGCAATC TGAAGAATAC AAGTTGTCTG TCTTGCCAGA TGGCGTTCCA ATCTTGTCTG
TTGAAGTTAT GTCCACCTTC GGCTGGTCTA AGTACTCTCA CCAACAATTC GGTTTGAACA
GATTCGGTGC TTCCGGTAAA GCTCCAGAAA TCTTCAAGCT CTTCGAATTC ACCCCAGAAG
GTGTTGCTGA AAGAGCTGCC AAGACTGTTG CCTTCTACAA GGGCAAGGAT GTTGTGTCTC
CATTGCGTTC TGCCTTCTGA ACGTTTGGTT ATGTCTCTCT TTTATCTAGT TACATTTAGT
TATGTTAAAT TTTAATTCAA GTTTTGGTTC TAGCTTGTGT AAATGAACAT TCATTTTATA
TAGCTTGCTC TCGTT
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| Protein sequence | MSSVDQKAIS TIRLLAVDAV AAANSGHPGA PLGLAPAAHA VFKKMRFNPK DTKWINRDRF
VLSNGHACAL LYSMLVLYGY DLTVEDLKKF RQLGSKTPGH PENTDVPGAE VTTGPLGQGI
CNGVGIALAQ AQFAATYNKP DFPISDSYTY VFLGDGCLME GVSSEASSLA GHLQLGNLIA
FWDDNKISID GSTEVAFTED VIARYKSYGW HIVEVSDADT DITAIAAAID EAKKVTNKPT
LVRLTTTIGF GSLAQGTHGV HGAPLKADDI KQLKTKWGFN PEESFAVPAE VTASYNEHVA
ENQKIQQQWN ELFAAYKQKY PELGAELQRR LDGKLPENWD KALPVYTPAD AAVATRKLSE
IVLSKIIPEV PEIIGGSADL TPSNLTKAKG TVDFQPAATG LGDYSGRYIR YGVREHAMGA
IMNGIAAFGA NYKNYGGTFL NFVSYAAGAV RLSALSEFPI TWVATHDSIG LGEDGPTHQP
IETLAHFRAT PNISVWRPAD GNETSAAYKS AIESTHTPHI LALTRQNLPQ LEGSSIEKAS
KGGYTLVQQD KADIIIVATG SEVSLAVDAL KVLEGQGIKA GVVSLPDQLT FDKQSEEYKL
SVLPDGVPIL SVEVMSTFGW SKYSHQQFGL NRFGASGKAP EIFKLFEFTP EGVAERAAKT
VAFYKGKDVV SPLRSAF
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