| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66941 |
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| Symbol | |
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| ID | 4837292 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1231011 |
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| End bp | 1234209 |
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| Gene Length | 3199 bp |
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| Protein Length | 794 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640388607 |
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| Product | predicted protein |
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| Protein accession | XP_001382453 |
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| Protein GI | 150863841 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5099] RNA-binding protein of the Puf family, translational repressor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.979611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCACTAACAC CTTTGGTGCC GTTACTTGCC CTTGCCCGCC GTCTGCAGCA GACCTACGTT
ACCACTCCAT CTTCCCCGCC TGACATCCCC CGCCAAAAGC GTGAAGTCTG TCTGTCTGAT
TATTTTGCAT CTACTCATCT TTTGATTTTC CAGCGAGCTT GACTTTGCCA GTTGGTTATT
GATCCGACCA AGACGTGAAT GTCTTTACAG TAATCTTTGT CTTTGTATAT TAACCTCGGA
TCCATATTCA CTGGATCTAT TCTTGTTCCA CGTCTCAAAC GCATACATCT GGCAATTCCA
GATCGTCCAA TCACATCATC CCTAGAGGAA TCTAACGCCA TACAAACCAG AACTTCATAC
TCTGGTTCAG CATAAAACAC ATAATACCTA GATCATAGAT ATCATTTCCA GATAGTTACC
GGCGTACTAA TTGCGAGCAG AATCTATCAT TTCTATTATC AGAATCTTCA ATATTTGATC
TGAATCCACA AATAAGAATC TTAATAAACC CTGATTGAAT ACTTGTCCGA TTCTAAAATA
TATTGGTAAC TACTATTGAT CTAATACTGT TAAAAGATAT CAATAATCTT CAACTATTCA
TCACCACTGT ACCATATCTG TACACTAGTA CTTGCATATT AATCATAATG ACAAACTTAC
AGTCGCGTTC TGCTTCTCTT TCTACTACCG TTGACGACTC GTCTATTGTG TCCAGTCCTC
CTGCTGCTCT TCCTTCGTTT GGTACCAAGC CAAGCATGAG ATCTGCCTCA ATCGGCTCGT
CTTTCTTCCA CAAAGACACG CCCAACTTCT TTGGTTCTAA ATCGGCTGCT GTTGCTGATA
CATCCTCTGG ATCTATTGAA GAAAAAGAAT CGTCGAGTTC TAACACCAAC ACCAATACTA
ACGTCAATTC CAACTCAAAA ACAGATGCCG TTCTTCCTAC GGCTGGTTCG AATGACTTGG
ATATCGTGGG TGCCATCGGA AATCTCGACT TGGATGACGA TTTTGCTGTA GACTCGAACG
AGGCTCTTTC CCAAGGTCAT CCTTCCAAGT CCACCACTCC TTTTCTGCAA CAATCAACCT
TTTTGTATGG GGACAACGTG AACAGTTACC AGTTCTACCA CCCTCATTAC CCTCCGCCAC
CTCACCAAGG CTCGTTGACA CCTAACCCCT CTCTTGGAGG CTTTGCTCCT ACTACCTTTG
GAGCTTCAAA CACGCCTTCC TCTACTTGGA ACAACTCGTT CATTCCTTCG TCTGCTCCTC
CATTTACTTA TAACAACGCT GGAAACAACG GTAACAAGGA TTTGGCTGCA GATTTGCCCT
CTTTTGTCAA GTCTTTTGAA CTTCCTTCGA CTGACGAATC TGAATCTGGT TCAGGCAATG
ATAAGAACGC CGACAAGAGC TCTAACGCAT CTAACTCTGC CAATGTCAAC TCCAATGTAG
CCCTTTTCTC CTCTCCTTTT GGCGGAATCT TGGACTCCCA ACTCCATTTT ATGCCTACTG
CCAATCTTTC TGGCGGCCAC ATGGTCAACG ACAAGAACGG TGAATCTGAA AACGACTTGG
GCTTGCTGGA GAAGGGCTCC AGCAACTTCC AGGGATCTTC TCCTCTTGAC TTCAATTCCC
ACCAGATGAA CGTTAAGAAA GGAGGCTACG ACTTAGCTGG TGTTCCTCCA TTTCCTACAG
GTTTGAACGA CAACTTATCG ATGCTTCCCA ACGTAATGGG TCATCCTGGA GCTCCGGGAG
GCCCCATGCC CAACATGTGG AACCAGCAGA TGATGAATTC TCAGTTGCAC CCCACAAATA
TGAGAAACAC CTATGACGGC AGAGGCATGG CTCCTCCACC TCCTCCTCAG AGCGGAATGC
ATCCTAACCA TCACATGATG GGCCAATTCA ACAACGGTGC CAACTCAGGA ACTCGTGGAA
ACAGCAATAG CAGCGGCAAC CACCACAATG GCCGCCACCG TGGCAATTAC ATGAACGATG
GTATGAATGT CCATCGCAAG ATGCACAACA GCATCAACAG TAGCAATGGC CACGGCAGAA
GAAAAGGCGA CGATGCTTCA AAGTATGCCA ATGCCAAATT GAGTGATTTT ACGGGCGAGA
TCTTCTCGTT GTGTAAAGAC CAGCATGGTT GTAGATTCTT GCAACGTCAG TTGGACTTGG
GCCGTGAAGT TGCAGAAGGC AGGAATACCG ATTCTTCTGT CTTGTCAAAC GACATTGCTG
CCACTATGAT ATTCAACGAA ATCTACTTGA AAATTGTTGA ATTGATGACG GATCCGTTCG
GCAACTACTT GATTCAGAAG TTATTTGAGA ACGTTTCCGT AGACCAGAGA ATTATCTTGG
TCAAAAACGC CGCTCCTGAG TTCATTCGTA TTGCATTAGA TCCACACGGT ACGAGAGCTT
TGCAAAAGTT GGTGGAGTGC ATTTCTACCG AAGAGGAGTC GAAGTTGATT ATTGGTTCCT
TGAGCCCTCA TATTGTATCT TTATCGAGAG ACTTGAACGG TAACCATGTA GTACAGAAGT
GTTTGCAGAA GTTGAAGCCG GAAGAGAACC AGTTCATCTT CGAAACAGCA TCATTGCATT
GCAACGAAAT CGCTACTCAC AGACACGGCT GTTGTGTCTT ACAGAGATGT TTGGACCACG
GCAACTCGGA CCAACGTAGG CAGTTGTCGT TAAAGGTGGC TGAAAATGCC ACCAACTTAT
CGCTTGACCC ATTCGGCAAC TACGTAGTTC AGTATGTCTT GTCCAGAGGT GACGAGGGAT
CGATCCAGAT CATCATGGAT CACATCAAGT CCAACATCAT TTCTTTATCG CTCCACAAAT
TCGGTTCCAA CGTCATTGAA AAGTCGTTGA GAATCAACAA GTTGACCAAC ACCTTGATCG
ACGTCTTGTT GAAGCACCAG GACAGATTCT CGGACATGTT GAATGACGCC TTTGGTAACT
ACGTGTTGCA AACCAGTTTG GATGTAGCCA ATCCGCAGGA CTTGAACAGC TTGTCTCAAG
CGTTGCAGCC CTTGTTGCCC AATATCAAGA ATACTCCTCA TGGCAGAAGG ATTATGACCA
AGATCCAGAG CATTATGTGA GGTTTGCTTG TTGTGCCATT TTTGTCTTGA CGAAAGTCTT
GCTTGTTTAT ATAGCTGTAT TTTAGACTGT ACATTATACG GAAGCATACT ATGTATGATT
AATATAATTA TGATAGCGT
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| Protein sequence | MTNLQSRSAS LSTTVDDSSI VSSPPAALPS FGTKPSMRSA SIGSSFFHKD TPNFFGSKSA
AVADTSSGSI EEKESSNAVL PTAGSNDLDI VGAIGNLDLD DDFAVDSNEA LSQGHPSKST
TPFSQQSTFL YGDNVNSYQF YHPHYPPPPH QGSLTPNPSL GGFAPTTFGA SNTPSSTWNN
SFIPSSAPPF TYNNAGNNGN KDLAADLPSF VKSFELPSTD ESESGSGNDK NADKSSNASN
SANVNSNVAL FSSPFGGILD SQLHFMPTAN LSGGHMVNDK NGESENDLGL SEKGSSNFQG
SSPLDFNSHQ MNVKKGGYDL AGVPPFPTGL NDNLSMLPNV MGHPGAPGGP MPNMWNQQMM
NSQLHPTNMR NTYDGRGMAP PPPPQSGMHP NHHMMGQFNN GANSGTRGNS NSSGNHHNGR
HRGNYMNDGM NVHRKMHNSI NSSNGHGRRK GDDASKYANA KLSDFTGEIF SLCKDQHGCR
FLQRQLDLGR EVAEGRNTDS SVLSNDIAAT MIFNEIYLKI VELMTDPFGN YLIQKLFENV
SVDQRIILVK NAAPEFIRIA LDPHGTRALQ KLVECISTEE ESKLIIGSLS PHIVSLSRDL
NGNHVVQKCL QKLKPEENQF IFETASLHCN EIATHRHGCC VLQRCLDHGN SDQRRQLSLK
VAENATNLSL DPFGNYVVQY VLSRGDEGSI QIIMDHIKSN IISLSLHKFG SNVIEKSLRI
NKLTNTLIDV LLKHQDRFSD MLNDAFGNYV LQTSLDVANP QDLNSLSQAL QPLLPNIKNT
PHGRRIMTKI QSIM
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