| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_56468 |
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| Symbol | CTA4 |
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| ID | 4837060 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1890740 |
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| End bp | 1893469 |
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| Gene Length | 2730 bp |
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| Protein Length | 876 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640388375 |
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| Product | Fungal transcriptional regulatory protein |
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| Protein accession | XP_001383134 |
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| Protein GI | 150864356 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.753603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.102552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCAT CCACAGAACC TGGCAGAGTC AGAAAAAGAA ACAAGCCAAC TTTGGTATGC
ACCAACTGCA AAAAGAGAAA AATCAAATGC GATCGTAAGA TGCCATGTTC CTCATGCGTA
AAGATGAACG CGGGTTTCTC GTGTTCATAT GAAACCAAAT GGCGATCTGT TTCCTTTGAA
GGAAGATCCC CAGCATTGCA TGGTTCTAAA TCACAATTGG AACATCAAGT TCTCAGAGAT
TCTAATATTA CCAACACTAG CAGTGGTTCA GGTAGTGAAA ATGGATCAGG ATCTAATGAA
ACAAACCCTT TGAAAGAAGA ATTGTCTTCA CTCAAGAGGA AGCTTAAACT TCTAGAAGAA
ACCTTGAGTT CACATGATTC CGCCACCCCA GAGGAAAAGT TCAATGCCAT AAATTCCGGG
AACTCCAATA GTTCCAGAAT CACAGGCTCT AATCTGGACT CTGCTTCCAG TATACATTCC
AACTCAGTCA ACCCAGTAGT TTCTGACGCT GACTTATTGG ACCTATATGG AGGCTACACT
TCATTACAGG TTAAGGGAAA TATTCGAAGA GTAAATTATG GGCCACTTTC GTGGGCTTCT
CTAATGCGTA AGGATCCTTG GTTGAACGTT TTGTGGAAAT ACGTGGACAA CAAACAACTA
GGGCTTACCT GTTTGATAAC CCAGAAGGTA CCCCAGATAT CTCAGGATGC CATCAATACC
CTTAATACTG ACAGAAGTGA AAGCACCGAA CTGAAGCAGG GGAACGAAGA AATTTTCCAG
AAAAAGGCAT TGGAGAATGA AGGAATAGAC GAGATGGTAC CTTTCAAAAG TTTGACCAAG
TTTACAAAAA ACCTGAATGA TACTAGTACA AAAATTTTAG AAAATGTCAA TGTCAGTACT
GTCACTTTGG GCAAGACCCT TTTTGATGGG AGATGCAATC CGGAATTACA ACTTATTGAA
AAAATAAAAA TGATATTACC TAAGAAAAAG GTATTATGGA GCTTAATAGA CAGATTTTTC
ATGAAGTTAT ATCTCCATTT CCCCTTTATT GACGAACTTG ACTTCAAGAA GGAACTTTCC
AAAATTATAG GTCCTGTCAG CTACGAAGAT GTGCCATTCG ACAAGGTAAA AATCGAAAAG
AAACTCGACT TGGCCATTAT AGCAATCTGT TTAATCTTGT TGAGACTAAC CTACTTGTCA
TTGTTCTCCA ATAGAAACTG TGTCAACGTC CATAGGATGA ACTCTTCGGA TGATAATATA
GAAAAGTACT TGCTTGAGAA CTCCATCAAT TTGGTCAATA TTGAAGTAGC CAACTCTTGC
ATTGAGTGTT TCCAATATGG CAGAAAATCT AATCTCACAG TATTCCAGGC CCTTTTATAC
ATGAGACTTT ACCGTTCCCA TGCTCCGGAA GAAGGTGATG GTGTTGATGG TGGTGACTCG
CAGGTCGCCA CCGCTATGCT CATTCAAATG GCATTTTCGC TAGGCTTGAA TCGAGAACCA
GAAAAATTTG ACAATTGCTT AGATCCCAAG ATTAACAACA TGGGCAGGAA GATATGGCAC
TTTTTGGTCA GATCTGATTT TATACATTGC TACAGTGTTG GGAATCCAAC AACTATTCAC
TTATCACATT TTGATACTAA GATCCCTTTT CTTGCTGAGG GGAACAGCAA TTTGGTAGAT
TTGGAACGCG AAACTGCAGC AATTAGATCG TTCTCATACT TGGGAGAAAG TTTGGGTACA
TTAAGAAAAG TTCTAGACAT GGTGATGGAC CTCAATAATG GAATTCCCAT AAATGAGTTG
ACGCAGAAAT TGAACGTCGT TGAAAGAGTA GCTAGCGAGG TTTTCAATGT TATTGAAAGT
ATTAGAAAAA TGCAATCCAC CAATGACTTG ACGTTGTTTG GCTATGTTGT GAAGTCGAAA
ATCTTCATCT CTGTCAAGAG TTCCTTGTTG ACACTCTACT ATCATTTGTA CTTGCATTAC
GAAAAACTTT ACAATAACGA GTTGTCGTAC TTCTACTTGA AGAAGATGTT TGCCATTATT
TACGAGGATA TTTTGCCATA TTTGTTTGAA TTATTATACG GTAACTTGGC TAATTCAGGC
TTGACTCTTA ATCCCTCCAT GGAACTTGCA CTTCACAAGA GCAACCAAGT AAATCTATCC
TGCTTAGCAA GAGTCAATTA TCTTCGTACT ATGATGGAAC TGAAAGCCGA TCACGCCAGA
AGATTGCAAA TAGACCAGGC TTACAACTCT CATTACTACC GCTTCAAGAG TTTGTCTACT
AACCTCAGAA GAACCGGAGA TTTGATAACT ATGATATTCG AAAGATTCGG TACTAGATAC
TACTACGCCT GGAGAGTATC CAAGGCACAT TCAAGTCTAT TCAAGTTCTT GGGTTCCAAT
GAGTTATTCA CGAAGTCAAT TCCTGGTATC AAGAAATTGC ATGCCTTCCA GTTTACTGCT
GAACAGCTTG AAGATTTGGA CAGTGTGGTC CATGCCATTG GTAAGAGAGT GGAAGGTGCT
GTGTTCTATG AAGATAGTGT GGACAAAGCT CCACCATTCG AGAAAGGCAC TGGCATTTCT
CCTTCAATTA GTGCCAAGTC GGAGATTGTA ACGCCTTACT CTTCCATAGG CTCTCCTCCG
CAAGAATCGC GTCCAAATAA CCAATACATA GATCAGATGT GGTTGCTGAT GATGGCGATG
AAGTTTGACC CAGTAGATCT GGAAGGAAAT
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| Protein sequence | MSPSTEPGRV RKRNKPTLVC TNCKKRKIKC DRKMPCSSCV KMNAGFSCSY ETKWRSVSFE
GRSPALHGSE NGSGSNETNP LKEELSSLKR KLKLLEETLS SHDSATPEEN SRITGSNSDS
ASSIHSNSVN PVVSDADLLD LYGGYTSLQV KGNIRRVNYG PLSWASLMRK DPWLNVLWKY
VDNKQLGLTC LITQKVPQIS QDAINTLNTD RSESTESKQG NEEIFQKKAL ENEGIDEMVP
FKSLTKFTKN SNDTSTKILE NVNVSTVTLG KTLFDGRCNP ELQLIEKIKM ILPKKKVLWS
LIDRFFMKLY LHFPFIDELD FKKELSKIIG PVSYEDVPFD KVKIEKKLDL AIIAICLILL
RLTYLSLFSN RNCVNVHRMN SSDDNIEKYL LENSINLVNI EVANSCIECF QYGRKSNLTV
FQALLYMRLY RSHAPEEGDG VDGGDSQVAT AMLIQMAFSL GLNREPEKFD NCLDPKINNM
GRKIWHFLVR SDFIHCYSVG NPTTIHLSHF DTKIPFLAEG NSNLVDLERE TAAIRSFSYL
GESLGTLRKV LDMVMDLNNG IPINELTQKL NVVERVASEV FNVIESIRKM QSTNDLTLFG
YVVKSKIFIS VKSSLLTLYY HLYLHYEKLY NNELSYFYLK KMFAIIYEDI LPYLFELLYG
NLANSGLTLN PSMELALHKS NQVNLSCLAR VNYLRTMMES KADHARRLQI DQAYNSHYYR
FKSLSTNLRR TGDLITMIFE RFGTRYYYAW RVSKAHSSLF KFLGSNELFT KSIPGIKKLH
AFQFTAEQLE DLDSVVHAIG KRVEGAVFYE DSVDKAPPFE KGTGISPSIS AKSEIVTPYS
SIGSPPQESR PNNQYIDQMW LSMMAMKFDP VDSEGN
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