| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_56382 |
|---|
| Symbol | |
|---|
| ID | 4837047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 40782 |
|---|
| End bp | 41465 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640388362 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382769 |
|---|
| Protein GI | 150864075 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0170] Dolichol kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTCCGTCACT TTTTGATCAA ACACGAAATC CCAAGAAAGG CATTCCACTC CTCGATTGGT
TTCTTCACGT TGTGGCTCTA CGTCAATGGT GTGCAAACAC GCCAGCTCCC ACTTCCGTTA
TTCGCAGCAT TCAGCATGGT GTTCTTGAAT GACTTCTTGA GATTCAGAGA CCCAGAATTC
AACCGTAGAG TTACTAAAGC CATGCTGTTC ATGATGAGAG AAAAGGAAGT TAACGAGTAT
AATGGAACTT TGTTCTACTT GCTTGGTTTG ACTATTGTTT TCGCCATCTT CCCTAAAGAT
ATATGCTTGA TGAGCGTCTT GCTTTTGAGT TGGGCCGATA CAGCAGCTTC TACTTTTGGT
AGACAATTCG GTAAGTATAC TCCAAAGATC ACAAAGGATA AGTCGCTTGC AGGTTCGCTT
GCGGCTTTTG TCACTGGAGT GTTCAGCTGT TACTTGTTAT ACGGATACTT TGTTCCGGTC
TATGATGCCA CTGTCAATTT TCCAGGAGAT ATTCTGTGGA CTGCAGAATC CAGCAAATTG
AGCGTCCATT CGTTTGCCTT GGCTAGTGGA TTTATTGCCA GTGTCTCTGA GTTCATAAAT
ATCTTCGATT TGGATGACAA TTTCACCATT CCAGTGTTGA GTGCCTTCTT CCTTGCTGCT
GTTGTCAAGA TATTCCACGT TTGA
|
|---|
| Protein sequence | FRHFLIKHEI PRKAFHSSIG FFTLWLYVNG VQTRQLPLPL FAAFSMVFLN DFLRFRDPEF
NRRVTKAMSF MMREKEVNEY NGTLFYLLGL TIVFAIFPKD ICLMSVLLLS WADTAASTFG
RQFGKYTPKI TKDKSLAGSL AAFVTGVFSC YLLYGYFVPV YDATVNFPGD ISWTAESSKL
SVHSFALASG FIASVSEFIN IFDLDDNFTI PVLSAFFLAA VVKIFHV
|
|---|
| |