| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_56356 |
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| Symbol | |
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| ID | 4837645 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 2560317 |
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| End bp | 2567252 |
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| Gene Length | 6936 bp |
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| Protein Length | 2283 aa |
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| Translation table | 12 |
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| GC content | 37% |
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| IMG OID | 640388960 |
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| Product | predicted protein |
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| Protein accession | XP_001383245 |
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| Protein GI | 150864433 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.614914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATC CGGAGATAAC TGAAAGTGAA CAGAGTTCGC TCAGTCCAGA TGTGCGTATC
ATAGAGCACC TTTGTCAGAA CGTAGTCAAC GCTTCCATTA ACAAGGAGAT TCTTCTCAAT
TGGCAGGTGG AGTTGGCAGA CACCATCGAG GACTATGCCT CTTTTGCCTC TCTTATAGCG
CACAATGTCA TCTTATCTGT TGACGACATC AATGACATCG ATTCCTACAG TAGATTGCCA
AATGTGGAGA AGCTTCTTAC ATTATTACAC TCGTTAGATA GCGAATTGTA TCGAGATTTC
AAGATCATCA TTCTCGAGAT CATCATCTAT TACTTGTCGT TATCATATAA TCTCAGAGTT
AGATTGATGA TGTTGAAGTT CCACCAGTTC CTCATTCTGC AATTCTTTGA TATACTTGAA
GATGAAGTGT CTGTAGAAGA ACCTCTGGAA CTGCAGCACG ACGGCGCGAT GCTTTCAGTG
CTAAGCCAGT ATATCAGACT ATTGACGTTA TTCTTTGAAC TTGGAAGTGA TTCCGTCAGT
TTAAAGCAGT TGATCTCACC ACTATACAAC TCTTCTACAA AACCTACTAC CAAATTGCAT
ATTCTAGATC TCTTACAACA AGTCTTTTCC AAGTACTCAT CTCATTTCAA CTTTGTAATA
TTCAACAAGG CTACGAGCTT CCCCTTCATC AACGAGGATC TCAAGAAAAA TCTCACAATA
CAGTCATGGT TCAAGATCAA CCCGCGAGAG TTCGATTCCG ATGAACCGCT TACCTTATTC
GTGTTAACCA ATTCTAGTGC ACACTCCGAA GATAATGCAG CTACCACATT AAATATTAGA
TTGATAAATT ACAGTCAATT CTTAATCGAG ATAAAGAATA ATCATAATGA CTCGAGAATG
CAATTCACCT TCAACCAAAT CTTAAATAAG TATGATGCAA ATGATAATGA TGGCTCTAAT
AATAATAGGA ATGTGATAAA CCAGGGATAT ACTCATTTCG CATTAACTTA CGACAATTAT
GCAAATTTGA ACTTGTATAT TGATGGAGAG TACAGTGAGT CGATTCCATG TCCAGAGATC
TACAAAATAC TATCTAGTTG GAATAAGGTG TATGTTGGAA GCGAGCAAAA CGACGTTCTT
GGTATTTCCT CTGATGAAAT AATAATTAAG AATTTGACTA TTCTCAATGT AAGTTTGTCG
CATGAATGGT TGAACTTGCT CTACAATCTT GGCTTGGGAT ATGATTGGGA TTTCAAAGAA
CTCACAAATG AAAATCTTTT CAACCTATTG AATCATCTCA GCTTTCGTAA TTTGACAAAT
GTCAAGATAA AGTTCAAAGA ACTCAATAGA AGAAGGAATG AGTCCAACAA GAGTACACAC
CAACTATTTG GAGAACATAA TGGCAAAACC CGTCAAATTC CCTCCTCTAA TACCTTGATT
CACAGAAGTA GTAGAGGGAA TCTATCAAAT AACAGCAGTT CAAGTATTCT GCCTGAAAGA
AACTCATTAG CTGAAAAAAG CGCTATTGTC AAATCTTTAG CGAAGTTGAA GCAGGAGAAC
ATTCTTTTTG ATACAAATGA TTTCTTTCAG ACGTTGAAAC AGCGGCAGAA AGTACATTCA
AAGGATAACT TACCAATACT ATTGGGGCCA GCGTCTTTTA TCTATCACGA TTCACACTCA
ATTCACGGTG GATTATACAG TATAGGAGGA ATATCATTGT TAGTTAATCT TATTGAAACG
TCACTCGAAG TTCCTGATTC AACTACTAGA GATACCTTAC TTTACAAGAG CTTGTTCCTA
CTTTTTACGA TCTTGGAGAA TAACTGGAGA CTATGCAAGG AATTTGAAAA TATTAATGGA
TACGAATTAC TCTCTATTAT ATTGAAGAAT TACAAGGAAA AATTCAATCC GACTTTGACA
TTTTCATTGT TGCCTGAGTT TGCTGATAAA AATGCAATTG AAAATTCTAC TGGCTGCCAT
GGAGCAAACC TCCTAAACTT AATTCTCACT TATTCGGGTT TCGATTTCAT TAATAATCAC
GATTCAGTCA TTGTGAATCG ACTCGCTTAT AGATTCCTAG TTCTTGATTT TGATTTATTC
TATGGGAGTG ATTCTTTTGA ATATTTGCTC TATCAGTTTC AGATATTGAT ACACAGTTCA
AAATTCAATG AATTTAACGT CTCTGAATTA ACAAAAATGA AACTTTTGAA GAAGCTACTT
CAATTCTTGA AACAACCGGT ATTGTTAAGG AATCCACTTA AGGATTCTAT GAAAGAGCAA
CTTGCGTTGA CAATTATCAG CATTATTCGG TCTGATCCCT CAGTTGAAAC AATCAGATCA
ATTTCGTTGT ACATCATATA TGCTTTGTAT AACGACGATT GTTCTAGCGA ATGCGGTGCA
ATTGTATTGT CTTCTTTGAC AGACTTTCTT TGTGAGGGCG GCTCGTCAAT AAAGACGTTG
AAGAAGTTCT CGAGATCGAT AACTATCCAT TGGATCTTGC TTTTATTCAG ATTGGAGAAA
TCAAAAGATG TGGCATTAAG TGGGCTTCGC TTATTGACGA GATTGCTAAA GACTTTGGGT
TCACATATTA TCAAGAGGTT CTTCTTAGTT AACCGTGGTC TAGATATCTT GACGTACTTC
CTCAAGCAGT GGTGGGATGA TGACGACATA TTATCAACTC TTTTCTTGGC CAGCTTTGGA
GTAGATAGAG ACGAAGGAAT TAATACTAAG TCGAGTGGCA AGTCAAACAA AGATCTTCTT
TCGGTCGTTG AAACCAATTT GCCAATCCTT AGTCAATTGG TCATCCCAGA CTTCTTATTG
CTATTAAACA ATCTTGCATT AAATTCAATG TATTCGTTGA GCATGCAATC AGAGATGATG
TTGGGGAGCA ATCCATCTTC TCCTCGAAAA GTTGGCGACG ACGAGAAGCT AACGTTATGC
CTCAATGTTT TGCATTTGAC AAATGAGTAT GCGGATGCAA TCAGCATAGG TTACGAAAGG
AATAAATCTT TGAGAGCAAT GTGTTTGTCA AAGGAATTTA TCGAGGGAAT ATCTGAATTA
TTGGGTTATT TCCATTTATC TTTGGGATGG GCAAGTATCG AAGTTAGAGG TGGATTCAAA
TCTGCATTTG AAAAGTTGAC AACAGTTATT GCGCAGTTCT TCATTTCAAA TTTAGGTGAA
AGCACCTTAA TCGGAATTCT TGAGGGACTT AGTGATTTTA CAAAGAAAAT GATATTTGAA
ATAGTATTTC CTAAGATATT TGAACATATT AATCAATTTG TGAACGTTTC AAACTTTATA
TTCAACGAAA GGCAATTTGT TGATTCTGCC ATATACTTGC TTAATTACTA CAACCAAGAG
TTTGTGAAGC AAAACTACTA CATTAGGTTC CAAGATATTG ACACTTACAT TACTAGTATG
GCATCAATAG TCGAAGTAGG TAACGACCAC GCTCATATCA AGAAGATCAA AAAGCAGCTA
GGGGAAACAA TCGTACTTAA ATTTTGCACA TTGGCTAGTG AGGAGATACA ATATGATGAC
AGTGAAGTCA CCAGGTATAT CGATACCGTC AAAACCCTCC TATATCGTCA GATTACGATC
TTGAACCCTG ACATATTGGA CGATCGAAAG TTGGGAGAGA TAGTCACACT CATGCTTGGT
TTGTTATTGA AGTTCAAGCC AGAAGAACAG GCACAGGGCC TTGAATATAC CTTCAGCTTT
CTTAGAACAA CATATCTCAT GAACCAAGAC CAATTTTCTA AGGTTATCGC TAATATTGAT
GCTGATGCAA AACTTCTAGC TGAATTTTTC ACAAATTTGG TGACGAGGAA TGACGAGGAG
ACATTTACAA AATTGCAGAA GTACCCACCA TTTATAAGGA GTCTTATGAA GAACTTTCAA
AGCCTCATTG TTTCTCACAA TAGAATAGAT CTTCTAAAGA CAATCGACAT GATCAAGGTC
ACGCTCCATA ATGGAGGAAA ACTTGGACAA ATGAATAGCA TTTACATCAA GAGTTTCGAA
AAGGATTGTG AACTGTTAAA GGCCCTGATA ATCAATGGAG AATTAATCAA ATTCAATCGC
TCTATTCAAG ACCATCAAGA GAATGTCCAA TTTTTTGTTT CGAACTATCA CCTATTGAAG
CTTGACATAT CTAGATTGAT CCAAGACGTG GATGGAAAGG ACAACTATAT CTTAGACTAC
ATTGAAAGTA ACGATAGAAT GCGAAGGCGC TTGGTCATAG AAGACCAAAT ACCTGAGTCC
GAGAAGTTAT CTTATAACAT TGATGTTCCA TTAAAAAAGT TGGACCCAAT TGAGTCAGGA
AACTATGTGA ATCTTCAGGA CTATGATTAT GCAATTGCAG CAAATGGGAT AGATACCCTC
AGTCTTTCTA CTGATAACTC TATTCTTCTA GATCCAGCTG ATGAATCGTT TGATATTAGC
GATGATAACC AAGATACGTC TGCTGAAGAG GTAGAAGCTA GATCAGCATA TGAAGATAAG
AACAGAAAAG TGCTAAGAAG TTTGTTCATG GGAGATCAAA TATTGGCACT TTGGAATATC
AGTCAAGTTA ACGGTTTAGT TCCAATCGAA AGTTTGATGA TTTTGGGATC ATCTCATTTG
TACTTGATTG AGAACTATTT CCATTGTCAG GATGGTAATG TAATTGATGT TCAAGACGCT
CCTCCTGAAG AGCGGGACCC AATTTTGCAT TTGGTTAATT CTCAATCAGA TAATGTTTTG
AGGAGTGACT CCAGATCACA CAGAAATAAA AGCTGGAGTT TGGACAAGTT GAGTAGTATT
TCGAAAAGAC AGTTTTTACT CAGAGATATT GCATTGGAGA TGTTCTTCAG TGATGGTGCC
AGCATTCTTA TAACGTGTCT ATCCCCTAGA AACAGAGATT CTATCTATGG TAAATTACAT
TCATATGCAA CTGGCAGGGG TTTGGATAGT GATTTGGCTC AGGCATTGCA GTATTCATCT
TCAACCAAAT ATAGTTCGAG TTCCTTAATG ACAAGCAATT CATCTTCATT CACATCCAGG
TTGGCATCAG CATTTGCATC TAGTGCTAGT TCACTCACTT CATCCTTTGT TAGCGCAACT
AGGAAATGGA GAATGGGAGA AATGTCTAAT TTCTATTATC TCATGATTAT CAATACTCTA
GCCGGTAGAA CATTCAACGA CTTGACGCAA TATCCTGTAT TTCCCTGGGT TATTGCCGAT
TATAGTAGCG ATACGCTTGA CTTATCTGAT CCACGATCTT TTCGGGACTT ATCCAAACCA
ATGGGAGCCC AGACACATGC CAGAGCACAA CAGTTCCAAG ATAGATACGA AGCCCTCGAT
AGTTTGAATG ACCATGACGC ACCAGCATTT CATTACGGAA CCCACTATTC ATCTGCTATG
ATCGTTACTT CATTTCTTAT TAGGTTGAAA CCGTACGTGC AATCATATTT ATTGTTACAA
GGAGGAAAGT TTGACCATGC GGATAGACTT TTCAATTCTG TAGAAAAAGC TTGGTTGTCG
GCGTCCAAAG ATAACACCAC AGATGTCAGA GAGTTAACAC CTGAATTCTA CTATTTGCCA
GAATTTTTGG TAAATTCCAA TAATTTTGAA TTTGGTACTT TTCAGAATGG CGAGTCTGCT
AATGATGTCG TGTTGCCTCC ATGGGCAAAA GGGGATCCCA AGATTTTCAT TGCAAAGAAC
AGAGAAGCTT TAGAAAGCTC TTATGTATCG GCGAACTTGC ACTTGTGGAT TGATTTAGTC
TTTGGTTTCA AACAAAGTGG CCCTGAAGCT GTTTCAGCTT TAAACGTATT CCATCACCTA
TCTTATAATG GTGCAACAAA TCTTGACAAC ATAAAGGACG AGATTGAAAA ACGAGCAGTA
ATAGGTATGA TAAATAATTT TGGACAGACA CCACTCCAGA TATTTGATAA ACCCCACGTT
CAGAAGGATG TGTTGAATGT GCCAAACTAT TATCTAAATT TGGTTGATAA AGAGAAGGGA
CCCAAGCTTC TTTTCGAATC AAAATTGAAA ATGCCAATTC AGAAGTTGGA GATAAGCTTA
CGGAGTAACA AGAAGTGGGT TGGTCGTCCT GCCTGTGTTT CCTCAGAAGA TGAGTTGCTC
ATTAGGAAGG CCAATGACTT CAAGTATGAG TCTGGATCCT TGATTATCAA CAAAACCACC
TTTTTGAATA TTCACCTGTC CAATCTTTCA AGTTTGTTGC AGATTGGAAA CAAGCAGCTA
TTGACGGGCT CTGAAGATGG TATTATTAAT GCTTGGAAAT GTGAATTACG ACCAAATATT
AGTCTTCAAT TCCAGGCAAT ATTAAGAGGT CATCTCAGTG AAGTTAAAAG TTTGAAATTA
AGTGATAGTT ACAAGTTGGC ACTCAGTTTG GATGTTGATG GGATAGTTAT CTTATGGGAT
TTAGCTCGCT TCAAATTCAT TAGAAAATTT GTTCCAATCG CAGACGTGAC AAACACGAGG
ATTAGCATTT CGAACGACAC TGGCAATATA GGAATAATGT ATTCAACAGC GACAAGCAAT
ACATTGAGAA TTTTCAATGT CAATGGCGAA TTGATCTTCT CCAAAGAATT CATTTATGAA
GATATTGAGA TTACCAGCTT TAATTTCGGA AACATAAATC TTGCAATTGC AGAATCCGGA
AAGACTCTGA TTAACAATGA CCACACATTT TGGTCTAATG AAATGTTTGC TATTGCTGCA
GAGAAAACAA TAGAGATCTA CGAATTGAAT CCTTTGGCAG ATCAGGGATG GGAAGTTCGT
AGATTAGACT CCATAGATCT ACTGGGAGAT CTAAAGGGAG ACATAACTGC TTTGGAGCTA
TTGAAGTCTT CTGAAGTTGA CAGCGAAGAT AACCTCTGCA GAGGATTTTT GAAACTCATT
ATCGGTGACT CTACTGGAAA GGTATATGGA ATGTAA
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| Protein sequence | MNNPEITESE QSSLSPDVRI IEHLCQNVVN ASINKEILLN WQVELADTIE DYASFASLIA
HNVILSVDDI NDIDSYSRLP NVEKLLTLLH SLDSELYRDF KIIILEIIIY YLSLSYNLRV
RLMMLKFHQF LISQFFDILE DEVSVEEPSE SQHDGAMLSV LSQYIRLLTL FFELGSDSVS
LKQLISPLYN SSTKPTTKLH ILDLLQQVFS KYSSHFNFVI FNKATSFPFI NEDLKKNLTI
QSWFKINPRE FDSDEPLTLF VLTNSSAHSE DNAATTLNIR LINYSQFLIE IKNNHNDSRM
QFTFNQILNK NVINQGYTHF ALTYDNYANL NLYIDGEYSE SIPCPEIYKI LSSWNKVYVG
SEQNDVLGIS SDEIIIKNLT ILNVSLSHEW LNLLYNLGLG YDWDFKELTN ENLFNLLNHL
SFRNLTNVKI KFKELNRRRN ESNKSTHQLF GEHNGKTRNL SNNSSSSISP ERNSLAEKSA
IVKSLAKLKQ ENILFDTNDF FQTLKQRQKV HSKDNLPILL GPASFIYHDS HSIHGGLYSI
GGISLLVNLI ETSLEVPDST TRDTLLYKSL FLLFTILENN WRLCKEFENI NGYELLSIIL
KNYKEKFNPT LTFSLLPEFA DKNAIENSTG CHGANLLNLI LTYSGFDFIN NHDSVIVNRL
AYRFLVLDFD LFYGSDSFEY LLYQFQILIH SSKFNEFNVS ELTKMKLLKK LLQFLKQPVL
LRNPLKDSMK EQLALTIISI IRSDPSVETI RSISLYIIYA LYNDDCSSEC GAIVLSSLTD
FLCEGGSSIK TLKKFSRSIT IHWILLLFRL EKSKDVALSG LRLLTRLLKT LGSHIIKRFF
LVNRGLDILT YFLKQWWDDD DILSTLFLAS FGVDRDEGIN TKSSGKSNKD LLSVVETNLP
ILSQLVIPDF LLLLNNLALN SMYSLSMQSE MMLGSNPSSP RKVGDDEKLT LCLNVLHLTN
EYADAISIGY ERNKSLRAMC LSKEFIEGIS ELLGYFHLSL GWASIEVRGG FKSAFEKLTT
VIAQFFISNL GESTLIGILE GLSDFTKKMI FEIVFPKIFE HINQFVNVSN FIFNERQFVD
SAIYLLNYYN QEFVKQNYYI RFQDIDTYIT SMASIVEVGN DHAHIKKIKK QLGETIVLKF
CTLASEEIQY DDSEVTRYID TVKTLLYRQI TILNPDILDD RKLGEIVTLM LGLLLKFKPE
EQAQGLEYTF SFLRTTYLMN QDQFSKVIAN IDADAKLLAE FFTNLVTRND EETFTKLQKY
PPFIRSLMKN FQSLIVSHNR IDLLKTIDMI KVTLHNGGKL GQMNSIYIKS FEKDCESLKA
SIINGELIKF NRSIQDHQEN VQFFVSNYHL LKLDISRLIQ DVDGKDNYIL DYIESNDRMR
RRLVIEDQIP ESEKLSYNID VPLKKLDPIE SGNYVNLQDY DYAIAANGID TLSLSTDNSI
LLDPADESFD ISDDNQDTSA EEVEARSAYE DKNRKVLRSL FMGDQILALW NISQVNGLVP
IESLMILGSS HLYLIENYFH CQDGNVIDVQ DAPPEERDPI LHLVNSQSDN VLRSDSRSHR
NKSWSLDKLS SISKRQFLLR DIALEMFFSD GASILITCLS PRNRDSIYGK LHSYATGRGL
DSDLAQALQY SSSTKYSSSS LMTSNSSSFT SRLASAFASS ASSLTSSFVS ATRKWRMGEM
SNFYYLMIIN TLAGRTFNDL TQYPVFPWVI ADYSSDTLDL SDPRSFRDLS KPMGAQTHAR
AQQFQDRYEA LDSLNDHDAP AFHYGTHYSS AMIVTSFLIR LKPYVQSYLL LQGGKFDHAD
RLFNSVEKAW LSASKDNTTD VRELTPEFYY LPEFLVNSNN FEFGTFQNGE SANDVVLPPW
AKGDPKIFIA KNREALESSY VSANLHLWID LVFGFKQSGP EAVSALNVFH HLSYNGATNL
DNIKDEIEKR AVIGMINNFG QTPLQIFDKP HVQKDVLNVP NYYLNLVDKE KGPKLLFESK
LKMPIQKLEI SLRSNKKWVG RPACVSSEDE LLIRKANDFK YESGSLIINK TTFLNIHSSN
LSSLLQIGNK QLLTGSEDGI INAWKCELRP NISLQFQAIL RGHLSEVKSL KLSDSYKLAL
SLDVDGIVIL WDLARFKFIR KFVPIADVTN TRISISNDTG NIGIMYSTAT SNTLRIFNVN
GELIFSKEFI YEDIEITSFN FGNINLAIAE SGKTSINNDH TFWSNEMFAI AAEKTIEIYE
LNPLADQGWE VRRLDSIDLS GDLKGDITAL ELLKSSEVDS EDNLCRGFLK LIIGDSTGKV
YGM
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