| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_56141 |
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| Symbol | HIR1 |
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| ID | 4837333 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 155692 |
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| End bp | 158839 |
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| Gene Length | 3148 bp |
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| Protein Length | 959 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640388648 |
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| Product | protein involved in cell-cycle regulation of histone transcription |
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| Protein accession | XP_001382260 |
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| Protein GI | 150863699 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0125544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCC TCAAGCTACC GTGGTTTGGA CACAAAAGTA TGTTCCAATT CACTTCCTTA
GAGACTTTAC ATTATTGCTA GCAGAGCATT TTGTAAGTGA AATATCCATG TTTCAGTACT
AACAATATCA GCTGAGAATA AGAACATTGA GTGTTATGCA GTCAGTATCA ATGCTGATGG
AACACGTCTC GCCTCTGGAG GGCTTGACGG CAATGTCAAG ATCTGGGATA CTAGCACCAT
CAACCCGTTC TTGAAATTGT GCTCAGATTC GGGTGCAACT TCCAGTAAAC CAGAATCTTC
AAATAAAAAG AGAAAATTAG AACCAACACC TGTGCCGAGT TCAAGACTCG AAGATAAAGA
TTTGCCGGTC GAATCCTTGA GGCGGCCCAT GTGCTCCATG AGTAGACACA ATGGTGTTGT
AACCAGTGTG AAGTTTTCAC CTGATGGTCG TTTTCTCGCA TCTGGTTCGG ATGACAAGAT
TTGTTTGATC TGGGAGAAAG ATGAAGAGCA ATCGAATCGA CCCAAGCAGT TTGGAGAAGT
AGTTGCAGAT TTGGAGCATT GGACCGTACG AAAGAGATTG GTGGCTCATG ATAATGATAT
TCAAGATATC TGTTGGTCGC CTGATGGAGG ATTGTTGGTT ACTGTAGGAT TGGATAGACT
GATTATCATA TGGAATGGGC TTACTTTTGA GCGTATTAAA CGGTACGATA TCCACCAGTC
TATGGTCAAG GGTGTAGTTT TTGATCCCGC CAATAAATTC TTTGCTACAG CTTCTGACGA
TAGAACGGTA CGTATTTTCA GATACTACAA GAAGTTAAAC GAGTATAACA ACTACGAATT
TCAGATGGAA CACATTGTGA TGGACCCGTT CAAGAAGTCG CCGTTAACCT CATATTTCCG
AAGGATGAGT TGGTCACCCG ATGGGCAACA TATTGCTGTA CCTAATGCGA CCAATGGTCC
TGTTCCTTCT ATTGCCATTA TCCGTAGAGG TAATTGGGCC ACTGATATCT CTTTGATCGG
CCACGAAGCT CCGTGTGAGG TTTGTTCCTT TTCTCCACGG TTGTTTGACA TTTCTGAAAC
TACCAAGAAA ACTACAAGTG ACTCTCAGTT TTCAACGATT CTTGCAACTG GTGGACAGGA
CCAAACCTTA GCCATATGGT CTACCGCCAC AAGTAGACCG CTTGTTGTTG CAGAAAACAT
AGTCAACAGC TCTATAACCG ATATCTGCTG GACTCCTGAT GGCCAGGCCC TCTATCTCAG
TTGTTTAGAT GGATCCATTA CGTGTGTATC TTTTGACAAG AACGAGCTCG GTAGGGTCGT
AAACGAGGAC ATTATCGATG CTCAGCTCCA TAGATATGGA GCTGACCGAG AATCGGCAAT
TTTCCCAGAA AGTGTAGAGC AATTGCAGTT GGAATATCGA TCGGAGTCTA AGTTGAGAAA
TGATAACAAG TTGTTGCTTA AACCTTCACT TTTGTTACAA AACAAGCCTG TTTCAAATAA
AACCGAAGCT GAACCAGTTG TCAGTTCGTC TCCAAAGATC ATTGACTTAC CTATAAAAAG
TGGACCATCT GAAAAGAACG ACAAATCTAT AAAACCAGTA AATAGAATAA CCCAGAATGT
GGTTATCATG AAGAATGGCA AGAAAAAAGT GGCACCAACA TTGGTGTCGG CATCGTCTAC
TAAATCATCC ACCTTTAGTT CTACTTCTAA GATGAATTCG ACTTCCAAGA AGATACAGCT
CAGTTCCAAG ATGTCACAGT CAGCATACTT CTTGCCGAGG TTAGGTATTC AGACTTCTGT
GCATGGATTT AAGATAAAGA ATGTAAACAA CCAGAGTATG AACAATGACC AGAATGAAGG
TCAGGACAAT GACAATGAGG ATATGGGTAT TGACGAAAAC ACTGGCAATT CAGCTAGCCT
GGCCAATATT TCAGAAGCAA CTTTGAAGAG ACAGAGAAAT AAAATCAAGC GTATGGTGAT
GGAGGTAAGA TATCCCAGCT GTTTCAAATT TGTCACTCAG CTTCCGGAAG CTCTTTTCAA
CAACCAATCG TTGATCAAAC ATGAAGTCCA GACTATCATC AATAACATTT CCAACAATGC
AAAGGAGATG CCAGCCGAGT TTTCTAGTAG TACTCTTTTG GATGTTGAGG AAGAGCTTCT
ATTTTCAGTT GTGTTACGTT CCGTAAGTCA CAATCACGAA ACAAATAAAG TCCTTGAAGA
AAATGGAGAT AAAGACGTCA AAACTGTCTT GACCACTATC GAAATCAGAA ATGGACAGAG
ATGGCGAGCC TCTGATGATG ACTTAGAATA TGATGATAGT ATTGATTTTG ATGACCCTAC
GAGAGTATTA GTTTCAGATA ACAATTCCAA CAAGTTAAGA AAGTATACAC TTTTCTTTCC
TTTTAGAATT CAGCACGTAT TGCCGTTGGT ATTAGATGAC CAGCTCAAGT TTATTGTCTT
TGTTTCATTT GAAGGAACAA TTCAGATAGT ACGTGCTGAG TCTGGGACTT ACCATAGTCC
CAGCTTTTCA TTGGGAGGGA ACGTTGTAAC GTTAATAAGC AGAGGCGAGA ACTTGATGGT
TTTAACCAAT CGCGGTCTTA TATATACTTG GAAGCTCTCT AGTTCACAAG GAGGTATGAA
GTGTATCATA CGAGGCGTCT CGATAGCTTC AGTACTAAAC ACAGTAGAAG TTCCTGTTAT
TGCTAAAAGT GTACCGGTCA ACGGAGTCAA TGGCAGTGCT AATGGTTTAT CAATCAATCT
TGGCGGTTCA AAGAAACCAT TATCGTTGGT GATGCCTAAT GTTCGTGTTA TCGACATTAA
TCCAGAAGAT GGGTCACCGT ATATAATCAC TGATTCCACA GGAGATATAT TTTCATACTC
CATCTCTCTT GGTTGTTGGA CCAAGATAGT TGATTCGTGG TATTTTCTCG CAGTAGATGA
CGATTATCGA TTGGATGATA CCAGTACTGA AAACAAGAAA TTGGTGGATC AGTTGATCTG
TAAGTCACTT GCCAAGTTTA CAGACGATGT CAGGAGGCTT AAGATTAATA GTTACGATTT
TTCCAAGGAT GGGGATGGTG TTGATGAATT ATATGATACA ATGCTTAGTC GGTTTCAAGA
AGTCCTTGAA ACGAAAGGTA TTAGTTAA
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| Protein sequence | MRILKLPWFG HKTENKNIEC YAVSINADGT RLASGGLDGN VKIWDTSTIN PFLKLKLEPT
PVPSSRLEDK DLPVESLRRP MCSMSRHNGV VTSVKFSPDG RFLASGSDDK ICLIWEKDEE
QSNRPKQFGE VVADLEHWTV RKRLVAHDND IQDICWSPDG GLLVTVGLDR SIIIWNGLTF
ERIKRYDIHQ SMVKGVVFDP ANKFFATASD DRTVRIFRYY KKLNEYNNYE FQMEHIVMDP
FKKSPLTSYF RRMSWSPDGQ HIAVPNATNG PVPSIAIIRR GNWATDISLI GHEAPCEVCS
FSPRLFDISE TTKKTTSDSQ FSTILATGGQ DQTLAIWSTA TSRPLVVAEN IVNSSITDIC
WTPDGQALYL SCLDGSITCV SFDKNELGRV VNEDIIDAQL HRYGADRESA IFPESVEQLQ
LEYRSESKLR NDNKLLLKPS LLLQNKPVSN KTEAEPVNDK SIKPVNRITQ NVVIMKNGKK
KVAPTLVSAS STKSSTFSST SKMNSTSKKI QLSSKMSQSA YFLPRLGIQT SVHGFKIKNV
NNQSMNNDQN EGQDNDNEDM GIDENTGNSA SSANISEATL KRQRNKIKRM VMEVRYPSCF
KFVTQLPEAL FNNQSLIKHE VQTIINNISN NAKEMPAEFS SSTLLDVEEE LLFSVVLRSV
SHNHETNKVL EENGDKDVKT VLTTIEIRNG QRWRASDDDL EYDDSIDFDD PTRVLVSDNN
SNKLRKYTLF FPFRIQHVLP LVLDDQLKFI VFVSFEGTIQ IVRAESGTYH SPSFSLGGNV
VTLISRGENL MVLTNRGLIY TWKLSSSQGG MKCIIRGVSI ASVLNTVEVP VIAKSKPLSL
VMPNVRVIDI NPEDGSPYII TDSTGDIFSY SISLGCWTKI VDSWYFLAVD DDYRLDDTST
ENKKLVDQLI CKSLAKFTDD VRRLKINSYD FSKDGDGVDE LYDTMLSRFQ EVLETKGIS
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