| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_54505 |
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| Symbol | STR3 |
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| ID | 4837166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 131617 |
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| End bp | 132852 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640388481 |
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| Product | cystathionine beta-lyase |
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| Protein accession | XP_001382256 |
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| Protein GI | 126131462 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01329] cystathionine beta-lyase, eukaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.383693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.155514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGCCCA AAAAATCAAG ATCCAAGCCC ATCAAGACCT ACTCGTTGGA GACTGAGTTG
GTCTTCAACA AATCCGCTGA CCAGTACAAT TCCTCAGTGG CTCCTTTGTA CCAGTCTGCT
ACTTTCAAAC AGGATTCGTT GTCCAACATG GGCGAGTACG ACTACACTCG TTCAGGAAAC
CCCACCAGAA CTCATTTGCA GAACCATTTG GCTCGTATCA TGAGAGCTAA ACATACCTTT
GCCGTGACTT CAGGCATGGG ATGTCTTGAT GTTATCACGA GGTTATTGAA ACCAGGTGAT
GAAGTAATTG CTGGTGATGA CTTATACGGA GGTACAAACC GTTTATTGAC TTACCTTCAC
AACAAGGGCG ACGTCAAGGC TTTCCACTAC GATACTACCA ATACTGAGCT CATCAAGTCA
AAAATCACCC GCGCTACCAA GATGATCTTT TTAGAATCGC CTACTAATCC ACTTATCAAG
GTTGTAGATG TTCGTTCCAT TTCTGAACAT GCTCATAAGG TCAATCCCGA TGTTGTTGTT
GTGTTCGATA ACACCATGAT GTCACCAATT TTCATGACAC CTTTGGATTT GGGAGTAGAC
ATTCAGTACG AGTCTGCCAC CAAGTATCTT AACGGTCACC ACGACATCAT GGCTGGTGTT
ATTGCTACGA GATCCGACAA GTTTGCTGAG CAGTTGTACA ACGTGATAAA TTCCACCGGA
TGCGGGTTGT CTCCGTTTGA TTCGTGGCTC TTGAGTAGAG GTTTGAGAAC GTTGGCTATC
AGGGTGGAAA GACAGCAACA GAACTGTATC AACGTCGCTG AGTTCTTGAA AAACATTGGC
TTCAAGGTCA GGTACCCTGG CTTAAAGGAT CACCCTCAGC ACGAATTACA TAACTCCATG
TGTAGAGGCT ATGGTGCCGT GTTGAGTTTC GAGACTGGCA ACATTAAATT GTCTGAGAGA
ATAGTGGAAA GCACAGAGAT CTTTGGTATT GCTGTTTCTT TTGGCTGTGT CAACTCGTTG
ATCTCAATGC CTTGTAAGAT GTCGCATGCC TCAATTGATG CTAAGACCAG AGAAGAAAGG
GACTTCCCTG AAGACTTGAT CAGATTATGT ATCGGTATCG AAAACTGCGA CGACTTGATC
GACGACTTGA CCAAAGCGTT GTTGAAGAGT GGAGCCGTCA GAATTAACGA AAGAGACGAG
CTCTTCAACG TTGTTCCTGT GCAGCCTAAG TTGTGA
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| Protein sequence | MSPKKSRSKP IKTYSLETEL VFNKSADQYN SSVAPLYQSA TFKQDSLSNM GEYDYTRSGN
PTRTHLQNHL ARIMRAKHTF AVTSGMGCLD VITRLLKPGD EVIAGDDLYG GTNRLLTYLH
NKGDVKAFHY DTTNTELIKS KITRATKMIF LESPTNPLIK VVDVRSISEH AHKVNPDVVV
VFDNTMMSPI FMTPLDLGVD IQYESATKYL NGHHDIMAGV IATRSDKFAE QLYNVINSTG
CGLSPFDSWL LSRGLRTLAI RVERQQQNCI NVAEFLKNIG FKVRYPGLKD HPQHELHNSM
CRGYGAVLSF ETGNIKLSER IVESTEIFGI AVSFGCVNSL ISMPCKMSHA SIDAKTREER
DFPEDLIRLC IGIENCDDLI DDLTKALLKS GAVRINERDE LFNVVPVQPK L
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