| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_54126 |
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| Symbol | |
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| ID | 4837564 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1747158 |
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| End bp | 1748642 |
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| Gene Length | 1485 bp |
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| Protein Length | 468 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640388879 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_001382559 |
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| Protein GI | 126132068 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.216144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAGG AAAATCCTCT ATTGCCATTT GCTTTCAACA GCTCTTCGTT CAACGATAAC
CTCCCATTAG ACACAACTCC ACGGAAAAGA GCTGTACGGG ACGAAAATGT CAGTTTGGCT
TATCGTACCC GGAAGTCGGA AGCTTCGCGA ACTCTCAACC GTCCCACATT GGCATTTGCT
CCCAGTCTCA AACGTAAAAT GGGAGAAAGT TTCAATGAAA AAGATGATAT CAAGAGAAGA
GAAACGGAAT TCGACAGCGA GCCCACTGTT GTAGACTTCG AGGAAGATTT CTCGCCTCAG
TTGGAAGATT CAGAAGAGGA CGACTACAAG GAGAATATCA GCTACAAGTC AATCTTACCT
CCAAGTAGTC CACCATTGGA CCATCCGCTA GTTTCCGAAT TTGACTTCAA CACAAATACG
AACTCTCGGT ATGACCTTCC GGAATCCCCG GAAAACAAGC ACGACTACAA CGATTTCCCA
AGCGAAGTCG ATTGGTTCAA ATACGGAGAA GAGGCCACTA TGGTGAGGTC TCAGTCTCAA
TCTTATTCAC CAGTCAAAGC AAAACAATTC AGTTCAGAGG CCGATTTCGG AATCGACAGT
TTCAACAGAT TCAAAAATAT AAGCAATCGC TGCCCTTCAT CCACTGGAGA CAGAGCTTTC
GAAGAGTCAC AGGTTTCGTA TGTCAAAGCC CGAGACATTA TCTTAGCAAG TTTTGAAGAT
GTCAAGACAG TCATCGACTT GGAAGGCATG AGCTTGTACG AATTGCCGGA TGAAATCAAG
GACATGAATA ACTTGGTCAT TTTCCAGTCT GATTTGGAAC CCATTTCGTA CCAGCTCTAC
TTATCGAACA ACAAGTTAAG ATGCTTACCT CCTTCACTAT TTAAATTCAC AAAGCTCAAC
GTACTTGGTT TGAGACAGAA TAAGATAAGC AGTCTTCCAG CATGTATCAA TAAGTTAGTT
CATTTGACTG ATTTGAATAT CGGTTCCAAC AGATTACAAT TTCTACCAAG TCAGATCCTT
GAATTGCCTT CTTTGCAAAC TTTCAGAGCT GGTCCCAACC CATTTCTAAA AGTGCCAGAA
GATGCTATTC CTGTGGAAAA TATTGAAGGG AATAGCTTAC GACAAAAGAA ATTTGTATCG
AAACCTCGTA TTCTTGCTTC CAACCGTAGT TTGGTTCCAT CGCTCAAGAC AATTTGCTTA
AATAGGATTG CTCAATATGA TGTTTCGTAC CAAGAAACGA AGAAATGGAA GAAATTCACA
CCAAAACTCT ACCATAGCAT GATAATTCGG GCAATCAAGA AAGGTCATTA TCACCAGAGC
TGCAGCGAAT GTTCCAACAT TGTAGTGGAA GCATATGCAG AGGTGTTTGA ATGGTGGGAC
ATATTGCAGA ATAAGAATGT TCCTGTCAGA AGACAACTTT GTTCTGGAGG CTGTTTAGAG
AGATATCAAG CACATAATAT TAACGAGATA GATGAAATTG CATAA
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| Protein sequence | MEKENPLLPF AFNSSSFNDN LPLDTTPRKR AVRDENVSLA YRTRKSEASR TLNRPTLAFA
PSLKRKMGES FNEKDDIKRR ETEFDSEPTV LEDSEEDDYK ENISYKSILP PSSPPLDHPL
VSEFDFNTNT NSRYDLPESP ENKHDYNDFP SESQSYSPVK AKQFSSEADF GIDSFNRFKN
ISNRCPSSTG DRAFEESQVS YVKARDIILA SFEDVKTVID LEGMSLYELP DEIKDMNNLV
IFQSDLEPIS YQLYLSNNKL RCLPPSLFKF TKLNVLGLRQ NKISSLPACI NKLVHLTDLN
IGSNRLQFLP SQILELPSLQ TFRAGPNPFL KVPEDAIPVE NIEGNSLRQK KFVSKPRILA
SNRSLVPSLK TICLNRIAQY DVSYQETKKW KKFTPKLYHS MIIRAIKKGH YHQSCSECSN
IVVEAYAEVF EWWDILQNKN VPVRRQLCSG GCLERYQAHN INEIDEIA
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