Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_42666 |
Symbol | |
ID | 4837007 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 356719 |
End bp | 357906 |
Gene Length | 1188 bp |
Protein Length | 372 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388322 |
Product | predicted protein |
Protein accession | XP_001382300 |
Protein GI | 150863733 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATC TACACAAGGC ATTTGTCAAG AGGATAAAAG ACCAGGAGAG GTCACTAGGG CTCACCCTGT TGTCAGAAAA GGATGAAGAA GAGCAAGAAG AGGAAGAAGA TGAAGATGGG GATGTTCTTT CTGGGATGAC TAAGTTTGGT TCTAGGCCCA CGATCCCTAC TGTACATCCA CTACATCCGC TACCATCTTC TACACGAGCC AGCACAGCTG ACCAAACTAC AGTAGACAAC TATGAAAATT TCAAACGAGT CCATTTCAAA GTGACAGAGA AATATACAAG GGCAGACGGA ATTTTGTCCA TAAGTACATA CTACAAACCT CCATCTTCTG CGAAAGATCC AATCTGTATC TTCCTTCATG GAGCTGGATC TACTGCTATG ACGTTTGCCT TCTTGTCACA GCTGATTGGT GAGATATCGG AAAATACTGG GTTGTTTTTG TTTGACCTTA GGGGACATGG AAACTCGTCT TTAACTAAGG ACTTTTCGTT AGACGCGCTT GTAGAAGACC TCCATTTTGT TCTCAATGAG TTTATTGGAA AACACAACAT CAATTCCAAT CCAATATACT TAGTGGGACA TTCTCTTGGA GGAGCCATAT CATCCAGCTT CCTACGTAAG TATCAAATGC AATATCCCCA AGTGAAAGGA CTGGTGGTTT TAGATATAGT AGAAGAAACA GCCGTCAAAT CCCTCGGGGC CATGCCAAAC TTCATTTCTA ATAGACCGAA GTCGTTTTCC AGTTTGACAA ATGCCATTAA GTGGCATATG GGCTTCTTGT TGTATAACAA GGCTTCTGCA GAAGTAAGTG TTCCTGACTT GTTCGATCTC GAAAGCTTGA CCTGGAAGAC AGACTTAGCT TTGACACAGC CATTCTGGTC AACCTGGTTC GACAAGTTGT CAGAAAACTT TCTCGGATTT AGAGGTCCCA AGCTATTAAT TCTCTCAGCG CATGAGACAC TCGATAAGAA TTTGATGATA GGGCAGATGC AGGGGAAATA TCAACTTGTA GTATTCAGCA ACCAACAGAA ATATGGTCAC TTCATTCATG AAGACTTGCC CCGACAGGTG GCTACATGCT TGTTGGATTT CATAAAGAGG AACGAAGATC CCGACAAGTT CATGAAGGAG GAGCTAGGAA TTATTCCTAA ATGGGGTGGC AAGATTCACC ACACATAG
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Protein sequence | MSDLHKAFVK RIKDQERSLG LTSLSEKDEE EQEEEEDEDG DVLSGMTNTA DQTTVDNYEN FKRVHFKVTE KYTRADGILS ISTYYKPPSS AKDPICIFLH GAGSTAMTFA FLSQSIGEIS ENTGLFLFDL RGHGNSSLTK DFSLDALVED LHFVLNEFIG KHNINSNPIY LVGHSLGGAI SSSFLRKYQM QYPQVKGSVV LDIVEETAVK SLGAMPNFIS NRPKSFSSLT NAIKWHMGFL LYNKASAEVS VPDLFDLESL TWKTDLALTQ PFWSTWFDKL SENFLGFRGP KLLILSAHET LDKNLMIGQM QGKYQLVVFS NQQKYGHFIH EDLPRQVATC LLDFIKRNED PDKFMKEELG IIPKWGGKIH HT
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