| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_42470 |
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| Symbol | NOB1 |
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| ID | 4837327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1970907 |
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| End bp | 1972352 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388642 |
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| Product | Predicted RNA-binding protein Nob1p involved in 26S proteasome assembly |
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| Protein accession | XP_001382605 |
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| Protein GI | 126132160 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1439] Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.652137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGAAG CTGTAGTTGA AAAGTTGGCA AACATTAAGG CGTTAGTGCT TGATGCTACT
CCACTCATCA CCCAACCTGC AACTGCTCTT CAGCAACATG CTCAGACGTT TTATACTACA
CCTGGAGTTC ATGGAGAATT GAAAGATGAG CATGCCAGAC AGCAGTTGAT CTTATGGGGG
GACAAGCTTA AGATCAGACA CCCAAAGCCT GAGTCCATTC AAAAGGTTAG TAGTTTTGCC
AAGTTGACAG GTGACTATGC TGTCTTGTCT ATTAACGATA TTCACATCAT TGCACTTGCC
TATGAATTGG AGATTGAGTT GAATAATGGT CCTTGGAGAT TGAGAAAGTA TCCAGGTGAA
AAGTTAGAGT ACAAGAAGAA AACTCCTGTA GTCGAGGAAA CCAAGGAAGA AACAGTCGGG
GGAGAAGATA AAGAAGAAGT CAAAGAAGAA ATCAAAGCTC CTGTTGTTAC TGAAGAGAGT
ACCGAGGAAC CCAAGAAGGC TAAGAAACCA CGTCGTAGAG GTGGAAAGAG ACAGAGAGAG
AAGAGAGAAG CCGAATTACA GAAGGCTCTA GATGAAGAAT CTGAAGAAAC TACCCCAGAG
GTCGAAGAAA CTAAGACAGA AGAACAACCT GCCGAATCAA CTACAAACGA AACCACTCAA
GACAATTCTG AACAAATAGA TGAAATTAAA GAAAATCATC TTGAAGAAGA TTATGAAGAA
GAAGATGACG ATGGAGAATG GATCACTCCA GAGAACTTGA TGGAAGAAAT AATGAAGGAT
AACAGTGAGC AGATTCAGGA AAGAACATCC ACTAGTAAGT CTGAGCCTTT CATCAAAGTA
GCACTTTCCA CCGGAGATTT TGCCTGTCAG AATGTAGCCA TGCAGATTGG TCTTAACTTG
ATGAATCCAT CGTCTGGTAA ACAGATCAAG AGAGTTCGTA ACTACATGTA CAGATGTCAT
GCCTGTTTCC GTTTAACACC TATTCCTAAG AACGGGACGC CTAAGCATTT CTGTCCCAAG
TGTGGTGGTA ATACGTTGTT GAGGTGTGCA GTTTCGGTGG ACAACATTAC AGGAAGAATC
ACCCCACACT TGAAGGCTAA CTTCCAGTGG ATCAAGAGAG GAGAAAAGTT TAGTTTGCCA
TCTCCATTGA GTAAGAACCA GCAGAGATTG GCTGGTAACG GTGGATACCA ACACAACAAA
GAAAACCGTC ACAAGTCGTT GCAAAACCCA TTGATATTGA GAGAAGACCA GAAGGAGTAT
CAGAAGGCTC TCAAAGATGA TGACTGGCAG AGAAGACAAC AAGAGAAGTT GTTGGAAGAA
TGGATTGGAG GCGGAAGTGC CGACAACTTT GTTTCTCCAT TTAGCAGTGT CAATTCGGGA
AGACATTCTG GTGTGAAGGT TGGTCGTGGC CGTTACGTCA ACTCATCCAG AGGAAAGAGA
AAGTAG
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| Protein sequence | MTEAVVEKLA NIKALVLDAT PLITQPATAL QQHAQTFYTT PGVHGELKDE HARQQLILWG
DKLKIRHPKP ESIQKVSSFA KLTGDYAVLS INDIHIIALA YELEIELNNG PWRLRKYPGE
KLEYKKKTPV VEETKEETVG GEDKEEVKEE IKAPVVTEES TEEPKKAKKP RRRGGKRQRE
KREAELQKAL DEESEETTPE VEETKTEEQP AESTTNETTQ DNSEQIDEIK ENHLEEDYEE
EDDDGEWITP ENLMEEIMKD NSEQIQERTS TSKSEPFIKV ALSTGDFACQ NVAMQIGLNL
MNPSSGKQIK RVRNYMYRCH ACFRLTPIPK NGTPKHFCPK CGGNTLLRCA VSVDNITGRI
TPHLKANFQW IKRGEKFSLP SPLSKNQQRL AGNGGYQHNK ENRHKSLQNP LILREDQKEY
QKALKDDDWQ RRQQEKLLEE WIGGGSADNF VSPFSSVNSG RHSGVKVGRG RYVNSSRGKR
K
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