Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_42412 |
Symbol | |
ID | 4836906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 643689 |
End bp | 644600 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388221 |
Product | predicted protein |
Protein accession | XP_001382362 |
Protein GI | 150863771 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0428] Predicted divalent heavy-metal cations transporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.107357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTCTG GTACCTGGTG GCAGCTTCTT TTGCTTGTCT CCATAATGGG AGTATCTGCA TTTGTGGGAG GTTTTGTTCC CTTGAGACTT CAGCTTTCTC CGTCTCATTT GAATGCTATC TCCATCTTCA GCGTTGGAAT CTTGATAGGA ACTTCTTTGG TTCTAGTGAT CCCTGAAGGT GTAGCGACTC TATATGGTGC CGTTCTGGAT GGCACTTCTC AATACTTGTC TCAGATCATG GGCCTTTCCC TATTGGCTGG ATTTGCCATG ATGTATATTC TTGACAATCT CCTGGCTATC TTAGCATTCT GTAGCATCCA AATGGATACT GCAGCTATTG TTGATCCATC TCAGCCGATC ACAATATCTG TGTTGATGAG ATCCGTGGTG CGATCTTCGT TGACTTCTGG TCTCATTTTG CATGCTTTGA CTGATGGAGT TTCACTTGGC TCTTCATTTG TCAAAGGAGA CTTGACATTT GAAATCGTAT TCTTCGTAGC CATAATCATC CACAAACTAC CTACAGCTTT CAGTTTGTCA ACTATACTCT TGAGAGAAGG TCAGATGCCA AAAGTCATTC TCATCCATTT GGCTCTTTTC TCTATCCTGA CCCCATTGAG TGCTATTATT ACGTTTGTGA TCATTAAGCT GACATCTCTG GATAACGAGT TGGTGGTAGG AATCATGTTC TTATTCTCAG CTGGCACTTT TCTTTACGTT GTAAGCCATG TCATGACTGA AATCTATAGT GTTGAAGACG AGAAGTCAGA ATTTACGTCA GTTCCAGCAA CATCGGATAG CGAAGCTACA GTGGTCCACC ATCTGGCCAA TTCTCTGAAT GGAACAGAAG TAGCTTTGAC TTTGGCTGGT ATGGCCATTA CAACACTTCT CAGTTTCATC GATCATGAAT AG
|
Protein sequence | MASGTWWQLL LLVSIMGVSA FVGGFVPLRL QLSPSHLNAI SIFSVGILIG TSLVLVIPEG VATLYGAVSD GTSQYLSQIM GLSLLAGFAM MYILDNLSAI LAFCSIQMDT AAIVDPSQPI TISVLMRSVV RSSLTSGLIL HALTDGVSLG SSFVKGDLTF EIVFFVAIII HKLPTAFSLS TILLREGQMP KVILIHLALF SISTPLSAII TFVIIKSTSS DNELVVGIMF LFSAGTFLYV VSHVMTEIYS VEDEKSEFTS VPATSDSEAT VVHHSANSSN GTEVALTLAG MAITTLLSFI DHE
|
| |