| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40839 |
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| Symbol | SMF3 |
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| ID | 4837535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 87413 |
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| End bp | 88984 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640388850 |
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| Product | vacuolar metal transporter |
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| Protein accession | XP_001382249 |
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| Protein GI | 150863691 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00844793 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTAAAT CCGAATCTTT CAACCGCGTG GGTCGGATAC TCAAAAAGTA CTACACTTTT
ATAGGGCCTG GTCTTGTAGT CTCTGTGAGT TATATGGACC CAGGCAATTA CCTGACGTCA
GTATCGTCTG GGTCGATGTA CCAATACAAA CTTTGCTTCG TTATTTTCAT GTCGAATCTT
TTTGCCGTCG TTTTACAATC ACTTTGTGTG AAGTTGGGAA CAGTCACAGG TCTAGACTTA
GCTGAGATGT GCCGATTGCA CCTTCCATAC CATTGGAACT TGTGCATGTA TGTTTGTGCT
GAGCTTGCTA TAATCGCGAC AGATTTGGCT GAGGTTGTCG GGACGGCAAT TTCTTTAGAG
ATTTTGTTTG GAATCCCGTT GATTTATGGT GTTCTCATTA CGGTGTTGGA TGTCTTAATC
GTTTTGATGG CCTACCACAA AGACGGGTCT ATGAGACAAA CTAGAATATT TGAGATCTTG
GTATCTGTGC TTGTATTTGC AACTTGTATC TGTTTCGTCT TGGAATTGTT TAACTGTAAT
TTTGAGGAAG GTGCTCTTGG AAACATCATC AGAGGCTTCC TTCCTCTCCA TAAGGAGATA
TTCCACGAAC AAACTGCCTT GTTCTTGAGT TGTGGTATTG TTGGTAGTAC AGTGATGCCC
CACTCGTTGT TCTTGGGTTC TGCTTTGGTT CAGGCTAGAT TGAAAGAATT TGATATCAAG
AACGGAATCA TCCAAGAACA AGGAGAAGAT GAAGACGATG ACGACGAGGC TAGTAGCATT
GTTCCGCAGG AGGAATTCTT GCCGGCTACT ATTAACAATT TCCGTAAGAT CTCTGACGGA
ACGAAGTTAC TCAACAAGTA TAGGCCTTCG TACAGGGCTA TCAAATACTG TTTGACATAT
TCTTATGCTG AGTTGATCAC TTCTTTGTTT ATCGTAGCCG TATTCGTCAA CTCCTCTATC
TTAATCGTGG CAGGTACTAC TTTGTACGGA AAACCAGATG CAGCAGATGC AGACTTGTTA
TCGATATACG AAATGTTGTC TTACTATATT AATCCAGCTG CGGGACTCGT CTTTGCACTT
TCCATGCTTT TCTCAGGTCA AAGTGCTGGT ATTGTCTGTA CTATGGCTGG TCAGATTATC
AGTGAAGGAT TCATAAACTG GACACTTAAG CCTTGGATCA GAAGAATTAT CACCAGAATA
TTGGCTATCT TGCCAGTGTT GTTTGCCATA GGTATTCTAG GTCGTGAAGG TGTTTCAAAG
ATCATGAACT CCTCTCAGGT GGTGTTGAGT TTCATCTTGC CAATAGTCAG CGCTCCTTTA
ATCTGGTTTA CGTGCAAAAA AGAATACATG ACAGTCTACG ATACATCAGA CGATGCTCCT
GCTGATGAAA CAAGTTTGCT ATTAAATAAC AGCCAGCAGC TGGTGGACTT GCCCACAACC
GAAATAACCG TGAGAAAATT GACCTTCGAA AATGGTATTG TTCTCACCAT TGCTAGCGTT
CTTACTTGGA CTATTATCAC GGCCTTGAAC ATCTATCTCA TCATTGCGTT TGCCAATGGC
GCCGACATAT AA
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| Protein sequence | MFKSESFNRV GRILKKYYTF IGPGLVVSVS YMDPGNYSTS VSSGSMYQYK LCFVIFMSNL
FAVVLQSLCV KLGTVTGLDL AEMCRLHLPY HWNLCMYVCA ELAIIATDLA EVVGTAISLE
ILFGIPLIYG VLITVLDVLI VLMAYHKDGS MRQTRIFEIL VSVLVFATCI CFVLELFNCN
FEEGALGNII RGFLPLHKEI FHEQTALFLS CGIVGSTVMP HSLFLGSALV QARLKEFDIK
NGIIQEQGED EDDDDEASSI VPQEEFLPAT INNFRKISDG TKLLNKYRPS YRAIKYCLTY
SYAELITSLF IVAVFVNSSI LIVAGTTLYG KPDAADADLL SIYEMLSYYI NPAAGLVFAL
SMLFSGQSAG IVCTMAGQII SEGFINWTLK PWIRRIITRI LAILPVLFAI GILGREGVSK
IMNSSQVVLS FILPIVSAPL IWFTCKKEYM TVYDTSDDAP ADETSLLLNN SQQSVDLPTT
EITVRKLTFE NGIVLTIASV LTWTIITALN IYLIIAFANG ADI
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