| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40593 |
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| Symbol | DBP8 |
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| ID | 4837198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1363370 |
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| End bp | 1364707 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640388513 |
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| Product | Dead-Box Protein 8, ATP-dependent helicase involved in rRNA processing |
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| Protein accession | XP_001382482 |
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| Protein GI | 150863861 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTTG AGGATCTCGG AGTTTCCCGG TGGCTCTCGG AAGCCCTTGC GGCCATGAAG
ATCCATACAC CAACAGCCAT TCAGTCAGGA TGTATACCCA AGATTCTTCT GGGACACGAT
TGTATAGGAG GTGCCAAAAC AGGTAGTGGT AAGACAATCG CATTTGCTGC TCCTATGTTA
ACACAATGGT CTGAAGACCC CTTTGGAATT TTTGGCTTAG TTCTTACTCC TACTCGTGAG
TTGGCACTTC AAATTGCTGA ACAGTTCGCT GCCTTGGGAG CTTCCATGAA TATCAAAATT
AGTGTAGTTG TAGGAGGGGA AGACTTCGTC AAACAGACGC TTGAGCTCCA GAAAAAGCCT
CATTTTGTCA TAGCTACTCC TGGAAGATTG GCGGATCATA TCTTGAACAG TGGAGAAGAA
ACGATCTCTG GACTCAGACG AATCAAGTAT CTTGTACTTG ATGAAGCAGA CAGACTTTTG
AGTAATAGCT TTGGTGGAGA CTTGGAGAGG TGTTTTTCTG TCCTTCCGCC TTCTGAAAAG
AGACAGACCT GTTTGTTCAC AGCTACGGTA ACTGATGCAG TTAGAGCGTT GAAGGAGAAG
CCTCCGGCGC AAGGAAAACC TCCTGTATTC TTGCACGAAG TAGAAACCGT GGACCAAGTG
GCCATCCCTT CGACTTTGTC TATCAAATAC GTCTTTGTTC CTTCCTATGT CAAGGAAGCT
TACTTAAACA GCATTCTCCG CTTGCCTCAG TACGAAAAGT CGACAGCGGT GATCTTTGTA
AATAGAACCA CCACGGCCGA AGTGTTGAGA AGAACACTCC GGAAGTTGGA GTTCCGAGTA
GCTTCGTTGC ACTCGGAGAT GCCGCAGAGT GAAAGAACGA ATTCTGTGCA ACGTTTTAAA
GCTGGTGCAG CCAGAATCTT GATTGCTACC GATGTGGCTT CTAGAGGGTT GGATATACCG
TCTGTTGAAT TAGTAGTAAA CTTCGATATT CCAGCTGATC CCGACGATTT CATTCATAGG
GTCGGTAGAA CTGCCAGAGC AGGAAGAAGT GGTGATGCCG TTACTATAAT CGCGGAAAAA
GATATCGACA GAATCGCTTC TATCGAAGAG AGAATAAATA AGAAAATGGA GTTATTGGAA
GAAGTCACTG ACGATAGTGT GATCACAGAC TCGTTGACGG CAACTAGTGT GGCCAAAAGA
GAGTCACTCA TGGAGATGGA CAAGGAGAAT TTTGGAGAGA AGAGAAAGAT TAATAGAAAA
AAGCGTGGTC TTGAGACTGA AAAGATCAGG GTGGTGAAGA GCAAGAAGGA GAAATCCAAG
AAGTCTCTTA GGCAATAG
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| Protein sequence | MSFEDLGVSR WLSEALAAMK IHTPTAIQSG CIPKILSGHD CIGGAKTGSG KTIAFAAPML
TQWSEDPFGI FGLVLTPTRE LALQIAEQFA ALGASMNIKI SVVVGGEDFV KQTLELQKKP
HFVIATPGRL ADHILNSGEE TISGLRRIKY LVLDEADRLL SNSFGGDLER CFSVLPPSEK
RQTCLFTATV TDAVRALKEK PPAQGKPPVF LHEVETVDQV AIPSTLSIKY VFVPSYVKEA
YLNSILRLPQ YEKSTAVIFV NRTTTAEVLR RTLRKLEFRV ASLHSEMPQS ERTNSVQRFK
AGAARILIAT DVASRGLDIP SVELVVNFDI PADPDDFIHR VGRTARAGRS GDAVTIIAEK
DIDRIASIEE RINKKMELLE EVTDDSVITD SLTATSVAKR ESLMEMDKEN FGEKRKINRK
KRGLETEKIR VVKSKKEKSK KSLRQ
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