| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40574 |
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| Symbol | |
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| ID | 4837379 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1427565 |
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| End bp | 1431779 |
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| Gene Length | 4215 bp |
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| Protein Length | 1381 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640388694 |
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| Product | predicted protein |
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| Protein accession | XP_001383040 |
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| Protein GI | 150864285 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.998296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.051152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAGCG ATCAGAACAC TATAGAAACC GATGAGCTCA AACCTCAAAA GAGACTATTT
AGTTTCTTGC TCAAAAACAA AGTGGTTCCG GTTCCCGAGG AATCAGAGCG TAAGATCTAT
CCTTTCCCCA CTGCCAATAT CTTCAGTAAG ATTTTCTTCT GGTGGTTGTT CCCGATTTTG
AATGTCGGCT ACAGAAGAAC ATTGCAACCA CAAGATTTCT TTGTACTTCC TGAAGAATAT
AAAGTCGATG CCTTTGTTGA GAAATTTGAT GCATGCTATG AACGCGAACT TGAATATTCC
CGGAAGAAAC ATTTGCAACA GAAATGCAAA GAAAGAGGTG AAACGTTGGA AACCTCAACT
GTAGCTCCTG ACATTGATCT TGAGGATTAT GTCTTGTCCA AATTCAGTTT ATTGTTCATC
ATATGTGTGG CATTCAAGAG GAATTTACTC TTCTCGGCCT CATTATCTAC AATTACTGCA
GCTATAGTCT CTTGTACTCC TTTGATTCTT AAAAAGTTAA TAGCGTATTC GGAAAGCAAA
TCATTAGATC CTTCCTTGAA TCCAGCAAAG GGTGTCGGGT ACGCTTTTGG AGTAGTGATC
TTTCTGTTGG TTTCCGGCAT TACCATGAAC CATTTCAATT ACCAAAGTTT GCTCATGGCT
GCGAAGGTCA AATCTTCGTT GACTCATGCT ATTACAAGAA AGTCTTTTAA GTTGAGCAAC
GCCTCGAAAC ACAAATTCCC TGATTCTAAG ATAACTTCTA TGGTTACAAC AGATCTTTCT
AGAATCGAAC TTGCTTGTGC ATATACTCCA TTTTTACTTT CTCTTCCTCT TGGAATTGTA
ATCATTATCA CTATTTTAGT CCTTAACATT GGTGTTGCTG CTGTTGTTGG TGTTGTTGTC
TTGCTTATAT TTTTGGCAGC AGTTTCGTAT TCGACTTCCC AGTTGTACCG ATTCAGAACT
GTTGTCAGCA AACTAACTGA TATTAGAGTT GGTTTGGTTA AGGAACTTAT CACCAACTTG
AAAATCATCA AGTTCTACTC ATGGGAAATT CCATATTTAT CAAATATTGT CAAGAGTAGA
TCCAATGAAA TCCAATACAT TTTGAAGATT CAAAAATTGA GAAACATTAT TTATGCTGTT
GCCATGTCTT TAACTGGTAT CACTGCCATG ATTGCCTTCT TGGTAATGTA TGGAATTGAG
GGAGCAACAA GAAACGCTAG TTCTATTTTC TCGTCTGTTT CTTCGTTTGA AATTTTATCC
TGGTGTATGA ATTTCATTCC AGCTTCTATT TCTGTTACTG CTGACATGCT TATGGCGTTG
AAGAGAATTG GTTTATTTTT GTCTGCTGAG GAAATCCAGC CAAAAGACAA CTACATCACC
AGATGTGAAG CAAAGAACCC TTACGCTATT CAAGTTACTG ATGCTGATTT CATGTGGGAG
AGTTTTGAAG ATGAGGATGA GCAGGATAAT AATAAAGAAG GTCAAGCATC TTCTCCCGAT
ATTGAAATGG AATCACTTGA CGATTCGAAC AAACCGCTGA CTTTCCAAGG TTTGAAGAAT
ATTAATCTTA GTATCGCAAA AGGAGAATTT GTTGTTATCA CTGGTTCAAT TGGTACTGGT
AAGTCGTCTT TGTTAAGCGC AATCGCCGGA ATCATGAATT GTGAAAGTGG CCTAGTCGAA
ATCAATGGAT CCTTGATGCT TTGTGGTGCC CCATGGGTTC AAAATGCCAC CATCAAAGAA
AATATCACAT TTGGTGCTGT ATACGATCGT GAATTATATG ATGAAGTTGT TTACGCCTGT
TCTTTGCAAC AGGATTTGGA AAACTTGCCT GCTGGTGATT TCACAGAGGT TGGAGAACGA
GGCGTTACTT TATCGGGGGG CCAAAAGGCT AGAATCAATT TGGCCAGAGC CGTCTACGCC
AACAAGGATA TTATTCTAAT GGACGATGTT TTGTCTGCTG TTGATGCCAG AGTTGGAAAG
CATATGGTGG AACAATGCTT CTTGGGAATT CTTAAATCTA AAACAAGATT GTTGGCTACT
CATCAATTAT CTTTGATTGG TTCTGCTGAT AGAATTATTT TCATGAACGG TGATGGTACT
ATTGAAGTTG GTACTATGGA ACTGCTCTTG CGTACCAATG ATGATTTCAG GAAGTTGACA
GCATTCAGTG AGGCTGAAGA AACCAAGGTT GAAAAGTCTC CAAGCAAGAA CGTGGAAGAG
TTCGATATTG GTGAAGAATT AATTCCAAAC TATAAGAAGA TGACTGATAA AATCGAAGGT
CTTACAAGAA GGAAGGCAAA GCAGAGCGAA CTTGGTGATG ATGAAGACAC CGAAGCCACC
TTCAGAGATA TTGCGGAGAA TAAGGATGCT TCCAAGGGTA AATTAATTGT TAATGAAGAA
AGAGCGGTCA ACCGATTAAA GGGAGAAATT TATTTGAATT ATTTGAAATT TGGATCTGGA
AGAGTAACTC CGTGGGGATT TCTTTTGGTT TTTGGAACAT TGTTAAGTTT ATCCACATTC
TGTGATATTT TCAGTAACAC CTGGTTGTCA TTCTGGATCT CAAGAAAATT TGATAAGTCC
GACGGGTTTT ATATTGCCTT TTATGTGTTA TTCAATATTC TTTGGGTGAT ATTATTAACC
ACGCAATTTA TTCTGTTGAT TACCATGACT ACGAATTCTT CAAAAAATTT GAACATGATG
GCAGTGAAAA AGATTATGCA TGTTCCTATG TCTTTCTTGG ATACAACACC AATGGGAAGA
ATTTTAAACA GGTTTACCAA GGATACTGAC GCTTTGGATA ACGAAATCAG CGAGAATTTG
AGATTATTTA CTGTATCTTT TGCCAAACTT ATTGGAATGG TTATTCTCTT CTTGGTCTAT
TTGCCATGGA TTGCTCTTGC CTTGCCAGTA ATCGGCATAC TTTTCTTACT TGTCTGCAAC
TATTACCAAG CCTCTTGTAG GGAAGTAAAG AGATTGGAGG CGGTTCAGCG TTCTTTTGTG
TTTGATAATT TAAGCGAGTC CTTGTCTGGT ATGACAACTA TCAAGACGCT CAAATCGGAA
GAAAGGTTTA TTAACAGAGG TAACCAGAGA CTCAACACTC TTAATGAAGC TAGTTTCTTG
TTGAATGCTC ATTTGAGGTG GTTGGCTATC CAACTTGACC TGGTTACGCT TGTTTTGGTT
TTGGCCATTG CACTTCTATG CGTAAATGGT GTATTCAAAT TAAGTCCTGC TACCGTCGGA
TTACTTTTAA CCTATTCCCT TCAAGCAACT GGAGAAATGT CGAATTTCTT CAGATTATTT
ACACAAGTGG AAAATGAATT CAATTCGGCA GAGAGAATTT GTCACTATGC ATTAAAATTA
CCACAAGAAG CAGCCTATGA ACACGAAAAC AATGCTCCAC ATAGGGAATG GCCCCAAAAT
GGAGAAATCG AATTTGAAAA TGTTTCCATG GCTTACAGAC CAGGGTTGCC CATGGTTATA
AGAGATTTGA GCTTCAAGGT AAAGTCAAGC GAGAAAATTG GTATTTGTGG TAGAACTGGT
GCTGGTAAAT CGTCGATTAT CACAGCCTTG TATCGTTTGA GCGAACTTGA TCAAGGCCGT
ATAATTATTG ACGGTGTCGA CATTGCCAAC ATTGGCTTGA GAGATTTGCG TTCAAAGCTT
TCAATTATTC CACAGGATCC AGTTTTATTC AATGGCACTG TCAGAAAAAA TTTGGATCCA
TTTGATGAAC ATGACGATGC ATACTTGTGG AAGACATTGA AAAGAGCTGG TATATTTAGT
GACGAAGAAA TAGCCCAAGC GGCAGAATAT AACAAGGAAG AGAATTCGGG AGCGGAATTG
TCCAAATTTC ACTTATATCA GAATGTGGAG GACGACGGCG CAAATTTCTC TTTGGGTGAG
AGACAATTAC TCGCGTTTGC TAGAGCACTT GTTAGAGATA CTAAGATTCT AATTTTAGAC
GAAGCCACAT CATCCGTGGA TTACGAGACG GATAGCAAGA TCCAGAGCAT AATCGCCAAG
GAGTTTGCTG ACTGTACGAT TTTGTGTATT GCCCATAGGT TGAAGACAAT TCTCAGCTAC
GATAGAATCC TTACCTTGGA TAAAGGCGAA ATTAAGGAAT TTGGTACGCC CGTGGAACTT
TTTAACTCCG ACGGAGGTAT ATTCAGGCAG ATGTGCGACA AGTCAAACAT CGGCATTTCC
GATTTCGTCC TTTAG
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| Protein sequence | MESDQNTIET DELKPQKRLF SFLLKNKVVP VPEESERKIY PFPTANIFSK IFFWWLFPIL
NVGYRRTLQP QDFFVLPEEY KVDAFVEKFD ACYERELEYS RKKHLQQKCK ERGETLETST
VAPDIDLEDY VLSKFSLLFI ICVAFKRNLL FSASLSTITA AIVSCTPLIL KKLIAYSESK
SLDPSLNPAK GVGYAFGVVI FSLVSGITMN HFNYQSLLMA AKVKSSLTHA ITRKSFKLSN
ASKHKFPDSK ITSMVTTDLS RIELACAYTP FLLSLPLGIV IIITILVLNI GVAAVVGVVV
LLIFLAAVSY STSQLYRFRT VVSKLTDIRV GLVKELITNL KIIKFYSWEI PYLSNIVKSR
SNEIQYILKI QKLRNIIYAV AMSLTGITAM IAFLVMYGIE GATRNASSIF SSVSSFEILS
WCMNFIPASI SVTADMLMAL KRIGLFLSAE EIQPKDNYIT RCEAKNPYAI QVTDADFMWE
SFEDEDEQDN NKEGQASSPD IEMESLDDSN KPSTFQGLKN INLSIAKGEF VVITGSIGTG
KSSLLSAIAG IMNCESGLVE INGSLMLCGA PWVQNATIKE NITFGAVYDR ELYDEVVYAC
SLQQDLENLP AGDFTEVGER GVTLSGGQKA RINLARAVYA NKDIILMDDV LSAVDARVGK
HMVEQCFLGI LKSKTRLLAT HQLSLIGSAD RIIFMNGDGT IEVGTMESLL RTNDDFRKLT
AFSEAEETKV EKSPSKNVEE FDIGEELIPN YKKMTDKIED IAENKDASKG KLIVNEERAV
NRLKGEIYLN YLKFGSGRVT PWGFLLVFGT LLSLSTFCDI FSNTWLSFWI SRKFDKSDGF
YIAFYVLFNI LWVILLTTQF ISLITMTTNS SKNLNMMAVK KIMHVPMSFL DTTPMGRILN
RFTKDTDALD NEISENLRLF TVSFAKLIGM VILFLVYLPW IALALPVIGI LFLLVCNYYQ
ASCREVKRLE AVQRSFVFDN LSESLSGMTT IKTLKSEERF INRGNQRLNT LNEASFLLNA
HLRWLAIQLD SVTLVLVLAI ALLCVNGVFK LSPATVGLLL TYSLQATGEM SNFFRLFTQV
ENEFNSAERI CHYALKLPQE AAYEHENNAP HREWPQNGEI EFENVSMAYR PGLPMVIRDL
SFKVKSSEKI GICGRTGAGK SSIITALYRL SELDQGRIII DGVDIANIGL RDLRSKLSII
PQDPVLFNGT VRKNLDPFDE HDDAYLWKTL KRAGIFSDEE IAQAAEYNKE ENSGAELSKF
HLYQNVEDDG ANFSLGERQL LAFARALVRD TKILILDEAT SSVDYETDSK IQSIIAKEFA
DCTILCIAHR LKTILSYDRI LTLDKGEIKE FGTPVELFNS DGGIFRQMCD KSNIGISDFV
L
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