Gene PICST_35218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_35218 
Symbol 
ID4836879 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2129557 
End bp2129998 
Gene Length442 bp 
Protein Length107 aa 
Translation table12 
GC content44% 
IMG OID640388194 
Productpredicted protein 
Protein accessionXP_001383171 
Protein GI126133292 
COG category[S] Function unknown 
COG ID[COG0011] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00106] uncharacterized protein, MTH1187 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.740234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTTA CAATTCCGTG TCTTGCTGAT GTTTGTTTGA TTCCCGTATG TTTTCTTTTT 
CGAATTTGGT AGTTGTCTAC TTTTTCTTAT CTTTGTTCCT ATTGTATTTT TTGAACTAGG
GGATAGTGAT ATGAATTCTC ATTTGCAGTA CTAACCTTAT CAGATCGGAA CGGGCTCTGT
GTCTGTTTCA GATGAAGTTA CTCAGATCAC TCGTCTAGCT CAGCAGTCCC ATTTGCACAC
TACCTTGCAC AGTGCTGGAA CCACCATAGA GGGTCCGTGG AATGAAGTCA TGGACTTGAT
TGGCCAGATG CACAAGCTAC TCCATGGCCA AGGGGTGGTG AGAATCCAGA GCGACATTAG
AGTAGGAACC AGAACAGACA AGAAGCAAAC TCCTCAGGAT AAAATCGACG TGGTGGAGCG
CAAGTTGAAG GACTTGCCGT AG
 
Protein sequence
MVVTIPCLAD VCLIPIGTGS VSVSDEVTQI TRLAQQSHLH TTLHSAGTTI EGPWNEVMDL 
IGQMHKLLHG QGVVRIQSDI RVGTRTDKKQ TPQDKIDVVE RKLKDLP