| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_35157 |
|---|
| Symbol | |
|---|
| ID | 4837649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 1818758 |
|---|
| End bp | 1819999 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640388964 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001383121 |
|---|
| Protein GI | 150864346 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0012] Predicted GTPase, probable translation factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGAG ACACCGTTAT TGGTCTTGTC GGGAAGCCCT CAAGCGGCAA GTCCACGACC
CTCAACTCGT TGACTGACGC CAACGCCAAA GTCGGAGCTT TTCCTTTCAC AACCATCGAT
CCCAACAAGG CTACTGGGTA TTTGGAGATA GATTGTGCAT GTGCCAGACA TAAAGTGCTG
GACTTATGTA AGCCCAACTA TGGCTACTGT CGCCAAGGTA AGCGTGGTGT TCCCATTATG
CTCTTAGATG TCGCCGGTCT TGTGCCCAAT GCCCATTTGG GCCGAGGTTT AGGTAACAAG
TTCTTGGGAG ACTTGACTGA GGCGGACTGT TTGATTCACA TTGTAGACGT TAGCGGCACA
ACTGATGCCG AAGGTAAGGC CACAAGAGGC TACGACCCCC TTCAAGATAT AGAATGGTTG
CAAGATGAAA TTTTCAGATG GATTTTGGGT AATCTAATGG AAAGATGGCC CTCTGTCGTG
AGAAGACACC GCGCAACTAA ATCAACTACA TTGGAGACTC TAAGACAGCA GTTGGGTGGG
TATTCGGCCA ATAAGCAGTT GATAGCGAAG GCGCTTGACC TTTTGCCAGG ATTGCAGCCC
TTGCAAGACT GGGATGATGC CACGATTCAG AAAGTCGTGC GTTCTTTCAT GGATGTCAAG
TTCCCTACAG TGCTAGCATT GAACAAGATG GACCATCCAG ACGCGGATAA AAACGTGTCC
AAAATCATCT TGAAGTATCC CAAGCTGAAG GTTGTACTAA CGTCATCGAT CACAGAAGTT
CTCTTGCGTA AATTGGCCAA TCAGAAGTTC ATCAAGTACG ACCTGGGCAC AGAGTTCATT
GACACCATTG ACGATTTGGG TCCAGAATCA GGACTAAAGC CGTTGGACGA CAAGTTGCGC
AACAGAATAG AGAATATCCG TGATTTGGTA TTGTACCGGT TTGGTTCAAC TGGTGTTGTT
GACTTGTTGA AGGCTGCTGC GTCGTTGTTA GACTTGGTGC CTGTCTATCC GGTGAGAAAC
ATCCACAACT TCTCTGGTGG TTCTGGTAAC AACGTGTTCA GAGACTGTGT GTTGATTAAA
CGGGGTACCC CAGTCATAAA TGTAGCTCGT AAGATCATGG GAGATGTCAC CATTGCCGCT
ATTGAGGGTG TCGGCGGTCA GAGGGTTGGC GAAGAAGACA CAGTTGACGT CGGCAAAAAC
GATATTCTCA GTTTCAAGAT AGTCCCGGGA GGCGGGAACT AA
|
|---|
| Protein sequence | MARDTVIGLV GKPSSGKSTT LNSLTDANAK VGAFPFTTID PNKATGYLEI DCACARHKVS
DLCKPNYGYC RQGKRGVPIM LLDVAGLVPN AHLGRGLGNK FLGDLTEADC LIHIVDVSGT
TDAEGKATRG YDPLQDIEWL QDEIFRWILG NLMERWPSVV RRHRATKSTT LETLRQQLGG
YSANKQLIAK ALDLLPGLQP LQDWDDATIQ KVVRSFMDVK FPTVLALNKM DHPDADKNVS
KIILKYPKSK VVLTSSITEV LLRKLANQKF IKYDSGTEFI DTIDDLGPES GLKPLDDKLR
NRIENIRDLV LYRFGSTGVV DLLKAAASLL DLVPVYPVRN IHNFSGGSGN NVFRDCVLIK
RGTPVINVAR KIMGDVTIAA IEGVGGQRVG EEDTVDVGKN DILSFKIVPG GGN
|
|---|
| |