Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_34859 |
Symbol | |
ID | 4836931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 466737 |
End bp | 467447 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640388246 |
Product | predicted protein |
Protein accession | XP_001382326 |
Protein GI | 126131602 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0662849 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCTCCA CCGCAACCAA AGTGCTCGTC GCCCTCTTCT TGGTGTCTAC CCACAAGACC CTACCCTTTG CCTACTTCTG TCGTTTCTAC TACCACATCA TCCGTCAGTT CATCTTGACA AACTGGACAT ACCACGAAAA GAGGTTAAAC ACCTTTGGCT TTACCAAACC AAATGATCTC TTCAATTGGG TCACCTTGAA GTCCAGAGTG TCTCCCTTGG AAATAGACAT GTACTTGCAC AAGTCCAATT CCACCTACTT TCTCGATTTG GATATCGCCA GAACCAAGTT GGTGATGAGA GTGTTCCAGA AACTCTTTTG GAACTGTTAC AAAAATGTCC ATGGCGAGTT CAAGACAACA GGGTTTGCTA ATATGCCTTA TGCTCCCATA GCTACGGTGC AAGCTTCGTT CAAAAGAGAA TTGAAGCCTT TCCAGTCTTT CGACATCAAG AGTAAGGTAT TTGCCTGGGA CGAAAAATGG CTCTTTATTT TGTCCAAGTT CGTCACAAAG GGTGACAAAT TGCACACCAT TGCCGTTACC AAGTACGTTT TTAAGAAGAA TGGCAGACAG ACCTTCAAGC CAGTGGACAT GCTCAAAGAT GCTGGCTTGT ATAGCGAGGA GGTCGAAGCT CAAAACGCAA AGAACTACCC ATTGGTCAGT CACATGGCTT CTATCGAAGA CTTAGAAAGG GTGGCCCATG AACTCAATTA G
|
Protein sequence | MLSTATKVLV ALFLVSTHKT LPFAYFCRFY YHIIRQFILT NWTYHEKRLN TFGFTKPNDL FNWVTLKSRV SPLEIDMYLH KSNSTYFLDL DIARTKLVMR VFQKLFWNCY KNVHGEFKTT GFANMPYAPI ATVQASFKRE LKPFQSFDIK SKVFAWDEKW LFILSKFVTK GDKLHTIAVT KYVFKKNGRQ TFKPVDMLKD AGLYSEEVEA QNAKNYPLVS HMASIEDLER VAHELN
|
| |