Gene PICST_34859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_34859 
Symbol 
ID4836931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp466737 
End bp467447 
Gene Length711 bp 
Protein Length236 aa 
Translation table12 
GC content45% 
IMG OID640388246 
Productpredicted protein 
Protein accessionXP_001382326 
Protein GI126131602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0662849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCCA CCGCAACCAA AGTGCTCGTC GCCCTCTTCT TGGTGTCTAC CCACAAGACC 
CTACCCTTTG CCTACTTCTG TCGTTTCTAC TACCACATCA TCCGTCAGTT CATCTTGACA
AACTGGACAT ACCACGAAAA GAGGTTAAAC ACCTTTGGCT TTACCAAACC AAATGATCTC
TTCAATTGGG TCACCTTGAA GTCCAGAGTG TCTCCCTTGG AAATAGACAT GTACTTGCAC
AAGTCCAATT CCACCTACTT TCTCGATTTG GATATCGCCA GAACCAAGTT GGTGATGAGA
GTGTTCCAGA AACTCTTTTG GAACTGTTAC AAAAATGTCC ATGGCGAGTT CAAGACAACA
GGGTTTGCTA ATATGCCTTA TGCTCCCATA GCTACGGTGC AAGCTTCGTT CAAAAGAGAA
TTGAAGCCTT TCCAGTCTTT CGACATCAAG AGTAAGGTAT TTGCCTGGGA CGAAAAATGG
CTCTTTATTT TGTCCAAGTT CGTCACAAAG GGTGACAAAT TGCACACCAT TGCCGTTACC
AAGTACGTTT TTAAGAAGAA TGGCAGACAG ACCTTCAAGC CAGTGGACAT GCTCAAAGAT
GCTGGCTTGT ATAGCGAGGA GGTCGAAGCT CAAAACGCAA AGAACTACCC ATTGGTCAGT
CACATGGCTT CTATCGAAGA CTTAGAAAGG GTGGCCCATG AACTCAATTA G
 
Protein sequence
MLSTATKVLV ALFLVSTHKT LPFAYFCRFY YHIIRQFILT NWTYHEKRLN TFGFTKPNDL 
FNWVTLKSRV SPLEIDMYLH KSNSTYFLDL DIARTKLVMR VFQKLFWNCY KNVHGEFKTT
GFANMPYAPI ATVQASFKRE LKPFQSFDIK SKVFAWDEKW LFILSKFVTK GDKLHTIAVT
KYVFKKNGRQ TFKPVDMLKD AGLYSEEVEA QNAKNYPLVS HMASIEDLER VAHELN