| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30270 |
|---|
| Symbol | SAM4 |
|---|
| ID | 4837518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 2416015 |
|---|
| End bp | 2417028 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640388833 |
|---|
| Product | AdoMet-homocysteine methyltransferase |
|---|
| Protein accession | XP_001383215 |
|---|
| Protein GI | 150864416 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAGCC TAAAGGAAGC TTTGTCCAAG AATCGTCTTG TATTGGACGG TGCCATGGGA
ACGGAATTGG AAGCGTGTAT CCCTAAAGAC TCCAAGATCC AGCCTCGAAA GCATCCATTG
TGGTCTGGGT TAGTTTTGCT CAACGAACCT AACTTGATCA AAAATGTCCA CTATAACTAT
TTAGAACAGG CCGATGTGGA TGCATTGATT AGCTCTACAT ACCAAATTTC GTACCCGAGT
TTAAAGGAGC ACACAGATTT GGACGATGAA CAAATCAGAG GGATATGGAA GAAGTCGATA
GATGTTGTTG AAGACGCAAT TCTCCAGTAC CGAAGCAAAA ACAGCAATTC TAAGAAGAAG
ATTTATATAA TTGGGTCAAT TGGTCCATAC GCGACTTACT TGGCTGATGG GTCAGAATAC
ACGGGAGACT ATAAGAATGC AAGTGATAGC GACATAGAAC TGTACCACCA GCCTTTACTT
GAATACTTTC TAGGTGACGA TAGAGTAGAT ACCATTGGCT TTGAAACCAT CCCTAGTTTC
CAAGAAGTCA AGGTTGTCTT GAAACTATTA TCGCACTTGT TTGCGGAACA AGAAAAACGC
AAGTACTACT ACATCAGCTT CAACTTCGAC GAGGCCACCA TCACAGACGG AACACCTACT
GAAGTGGTTA TTTCGTATAT CGATAGTTTC TTGGACAAGT ATCCTTTCTT GCGGAAGTAT
ATGGTGGGAC TTGGACTAAA TTGTATAGAC TACCACAAGA TCGGAAGCAT TGTCGCTAAG
ATCAACGATT CCCAGACTTC AGCACAAAAG CCTTTATTTC CACTTATAGT GTACCCCAAT
TTCACCATAA AGTATGTCCC AGAGGAAGAC GACTACAGGG CTTACAAAGA CATAGAAAAG
TGGAAGGAAC TTGTTAGCGA GTGGGTGACA ATTCCCAATG TGAGAATGAT AGGAGGCTGT
TGCAGCACCT CGCCCAAAGA AATCAAAGAA GTGAGAAGAA TCATTGGTAC GTAG
|
|---|
| Protein sequence | MLSLKEALSK NRLVLDGAMG TELEACIPKD SKIQPRKHPL WSGLVLLNEP NLIKNVHYNY
LEQADVDALI SSTYQISYPS LKEHTDLDDE QIRGIWKKSI DVVEDAILQY RSKNSNSKKK
IYIIGSIGPY ATYLADGSEY TGDYKNASDS DIESYHQPLL EYFLGDDRVD TIGFETIPSF
QEVKVVLKLL SHLFAEQEKR KYYYISFNFD EATITDGTPT EVVISYIDSF LDKYPFLRKY
MVGLGLNCID YHKIGSIVAK INDSQTSAQK PLFPLIVYPN FTIKYVPEED DYRAYKDIEK
WKELVSEWVT IPNVRMIGGC CSTSPKEIKE VRRIIGT
|
|---|
| |