| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30247 |
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| Symbol | GPI12 |
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| ID | 4837309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 2352352 |
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| End bp | 2353290 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640388624 |
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| Product | N-acetylglucosaminyl phosphatidylinositol de-N-acetylase |
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| Protein accession | XP_001383206 |
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| Protein GI | 150864412 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0132801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.189227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTATTGA GCATACCCTC GTTTATATTC AAGGTCTTCA GCACTACGTT CCTAGTGTGG
ATTGTGCTTT CCACTGCGAT ACCCCAACTT CTACTGAAAT ACACAGACAA AGAGATCCAG
TCCAACCATT TCCAGAAAAC AAATTACCCA TATAACTCGT TGACGTCTCC GACGCCATTA
CCCATCCAAA ACAGCACAGT ATACTTCATA ATCGGCCATC CTGACGATGA AGTGATGTTC
TTCTCACCTT CTTTGATTGA GTTGGCTAAG GCTAAACACC AGAATAATGT CAAACTCATC
TGTTTTTCAA CAGGAGATTC AGTCGATGAA TCTTTCGGAG GCATTCGTAG TGCTGAGCTC
ATCAACTCTG CTCGGATCTT AGGTTTACCA TCGGAGAACA TCACGATTCT CGACAAGTTC
AAGGATGGAA TGAATATCAC CTGGGACTCT AACGATATTA GAGAAACCTT GAAAGAGCTC
ATAGGAACCG GACCCCAGAA AGAACCGGTA GTTTTGATCA CATTTGACGA GAAGGGAGTG
TCGAACCATC CAAACCATAT TTCCCTCTAT GTTGGAACTG TCAACTATTT CAAGACATAC
TTTAAGAACA ATAAGGATGT CACGTTGTTC GTGTTGAAAA GTCTTACTTT CTGGGAGAAG
TATAGTTTCA CTTTCTTGAG TAGCGTCGAA TTATTTGTCG ACCATGTGTC AAAGCTATTC
TTCAGCAATT TTTTCAAGAT TGACATTAAC ATCAGCTTCT TCACTAAGAG TAGTCTTCCC
AACACAAATG CTATCAAGTT CTATTCAGAC TTGAATATGC TCAGTGTCAG TTACGCAGCA
ATGTGCTATG GACATTACAG TCAGATGGTG TGGTTCAGGT ATGGTTGGAT AATACTCAGC
AGATACTTGA CATTTAACCA TCTTATTCAA ATTACCTAA
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| Protein sequence | MLLSIPSFIF KVFSTTFLVW IVLSTAIPQL LSKYTDKEIQ SNHFQKTNYP YNSLTSPTPL
PIQNSTVYFI IGHPDDEVMF FSPSLIELAK AKHQNNVKLI CFSTGDSVDE SFGGIRSAEL
INSARILGLP SENITILDKF KDGMNITWDS NDIRETLKEL IGTGPQKEPV VLITFDEKGV
SNHPNHISLY VGTVNYFKTY FKNNKDVTLF VLKSLTFWEK YSFTFLSSVE LFVDHVSKLF
FSNFFKIDIN ISFFTKSSLP NTNAIKFYSD LNMLSVSYAA MCYGHYSQMV WFRYGWIILS
RYLTFNHLIQ IT
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