| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30035 |
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| Symbol | LAC1 |
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| ID | 4837244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1781196 |
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| End bp | 1782860 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640388559 |
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| Product | Lactose permease |
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| Protein accession | XP_001383110 |
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| Protein GI | 126133170 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTG AAATGCTTAG CAAAAGTGAA GTTAAGTATG AGCAGAATGA AATGGAAGGC
AGTCAAGAGA AACTTGCCTT GAAAGATGAA GATAGCAAAG ACTTCTACAA AGTAAATGAA
GCCTACAATG AGAAAGGCTT TCCTTTGCTT AGTAGACCCA TGATCCCACT CCTTTTGACA
TGTTCAGTGG TCTATTTTGT TTCGACAAAT ACAGGCTTCG ATGGGTCCTT GATGTCCAGT
ATCTACACTC AACAAGATTA CTTGGACAAA TTTAATCTTA GCATCAATTC TTCCACTTCT
ACTGGTCTAG TCTTTTCCAT CTACAATGTT GCCCAGATAT GTGCAGCATT CTTCTGTCCT
CTAATTGATT TTTGGGGAAG AAAGAAGTTG ATTCTTATTG GCTGTTGGGG TACAGTTCTT
GGAGCTATCA TCACTGCTTT TGCCCAGAAC AAGGAAACTC TTATTGCTGG AAGATTTGTT
CTTTCTTTTT TCACTACGCT TGCCAACACA TCGGCCTCTT TGTATGTCAC AGAAATTGCC
AACACGTACA ACAGATCAGT TGTTGCAGGT TGTTACAATA CTTTGTGGTA CATAGGGTCT
GTGTTGGCGG CATTTACTAG TTACGGTGCT AATGTCAACC TTGGAGGGAC TGAGTTAGCT
TTCCGTTTAC CTCTTGGAAT TCAAGCTGTT TTCCCTGGAT TGGTGGGAAT CTTTGGTTTC
TTTATTCCTG AAAGCCCCAG ATGGTTGGTT GGCGTTGGAA GAGAAAAGGA AGCCGAAGAA
ATGATTGCCA AGTACCATTG CAATGGAGAT TTCTCGCATC CATTACTAGA GCACGAAATG
GTTCAGATTA ATGAATCGTT TAGGGGCAAT AAGCTAGCTC AGTCTTTAAA GATTTTGGAC
CTCCGCCCCA TATTCCAAAA TAATAACGCT TATCGTTCTA TTCTTGTTAT CTTGATGGCA
TTCTTTGGTC AGTTCAGTGG AAATAATGTT TGCTCTTATT ACTTGCCCAC TATGCTCAGA
AACATAGGAA TGACAACTGT TAGCACCAAT GTCTTGATGA ATGCCTTCTA TTCTTTGATA
TCTTGGTTCT CCTCTATTGC TGGTTCATTT GCACATCAAA AAGTTGGCAG AAGAAAGATG
TTCATGTTCT CCACGTTGGC TGCTTCAGCA TGTCTCACTG GATTGGCAGT TGCAACTGCA
AGATATCAGG CTACAAGTGC TTTTGCTGCT TCAACAACAG CTATTGTTTT CATATATCTC
TTTGGGGTAA TGTTCTCATT TGCGTTTACC CCTATGCAAC CTATCTATCC TGCTGAAATA
TCTTCTAACG TCTTGAGATC TCGATCCATG ATAGTTCTCA ATATAACTGC TGGCTGTGCC
CAGTTCATCA ATCAATTTGC AGCTCCCGCC GCCATGGAAA ATATAAAATA CTGGTTCTAT
GTATTTTACG TCTTCTGGGA CATATTTGAA TGTATAATTA TCTACTTCTT TTTCGTGGAA
ACTAAAGGAA AGTCCTTGGA AGAAATCGAT GCAATCTTTG AAGCCAGAAA TCCAAGAAAG
GTTTCTGTGG GTGACTATTC AGATGAAGAT GGACCAAAAA TCAATTGGTT ATATATGAGA
TCAGTTGGGC AATACGTTTC TAGAAGAAAG TCTGGAATGA ATTGA
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| Protein sequence | MSSEMLSKSE VKYEQNEMEG SQEKLALKDE DSKDFYKVNE AYNEKGFPLL SRPMIPLLLT
CSVVYFVSTN TGFDGSLMSS IYTQQDYLDK FNLSINSSTS TGLVFSIYNV AQICAAFFCP
LIDFWGRKKL ILIGCWGTVL GAIITAFAQN KETLIAGRFV LSFFTTLANT SASLYVTEIA
NTYNRSVVAG CYNTLWYIGS VLAAFTSYGA NVNLGGTELA FRLPLGIQAV FPGLVGIFGF
FIPESPRWLV GVGREKEAEE MIAKYHCNGD FSHPLLEHEM VQINESFRGN KLAQSLKILD
LRPIFQNNNA YRSILVILMA FFGQFSGNNV CSYYLPTMLR NIGMTTVSTN VLMNAFYSLI
SWFSSIAGSF AHQKVGRRKM FMFSTLAASA CLTGLAVATA RYQATSAFAA STTAIVFIYL
FGVMFSFAFT PMQPIYPAEI SSNVLRSRSM IVLNITAGCA QFINQFAAPA AMENIKYWFY
VFYVFWDIFE CIIIYFFFVE TKGKSLEEID AIFEARNPRK VSVGDYSDED GPKINWLYMR
SVGQYVSRRK SGMN
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