| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30030 |
|---|
| Symbol | |
|---|
| ID | 4836638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 1767789 |
|---|
| End bp | 1768751 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640387953 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382566 |
|---|
| Protein GI | 150863920 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0364402 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATCT CCGCTCTCTT CAGGAAGGCT GCCAGACTGA AGTCTAACGG GAATCCCATT
TCTTCAAGTA CCGGCACATC CCAAAACCCC ACAATTAGCC ATGGAGACAG GGCTAGCGAT
GCTCATCTTA GCCAAAAGGA ACAAACAACT AATTCTAACC CCAGACGCAA ATCTGTAGAG
CCTGTAACGA TACAATTGTA TTCGCATAAC ATACGTTGCG ACACCTGGAA CCTCAAACGG
AATGAAGAGT CTTGGGCAAA GAGGAGAGCC AGAGTTATAG ACTGTATTAC CCACTGTTCA
GCTCATCTTC CCACCATAGT GGGTCTCCAA GAAGTCAAGA AGAACCAGTT GGACGATATA
ATCCAAGGTT TAGGCTCTGG ATGGGACTAC TTTGGCGTTG GTAGAGACGA TGGCATTGAT
AAAGGAGAAT TTGCACCCAT TTTCTACAAA TCATCGGAGT GGCAGTTAGT ATCTGGAACC
ACATACTGGT TGAGCGAAAC ACCTGCTAAG CCAAGTAAAG GCTGGGACGC AGCACTACCC
CGTATAGTAA CCTCCATAAT AGTTAAACAC AAGCAGCTGG GTAGGGAAAT CAAATGTATG
AACACCCACT ATGACCATAA AGGAAAAGAA GCCAGAAACA ACTCTTCCAG AATGATAAAA
GAACTAGCTT CTGACCATAG CCATGTATGC TGTGTACTTG GAGACTTCAA CGCTGAACCT
GACCATGTGG CCTATCTGAT TCTTGCATCA GGCAACTTGT TGGATACAGC TACAAATTGT
TTTAAGAGAG ATGGCTTTCA GTATACTTTC TCTGGTTTCA GCAAGGAAGA AAGTGAAAGT
ACCATAGATT ATATCTGGGT AACACTTCCA GCTCGTATCC TAAAGTTCCA TGTGATGAAT
AATGAATTCA ATGACAGAAA CTTCTCCGAC CACCGTCCTC TCAGTACAAT TATCCAAATC
TAG
|
|---|
| Protein sequence | MGISALFRKA ARSKSNGNPI SSSTGTSQNP TISHGDRASD AHLSQKEQTT NSNPRRKSVE
PVTIQLYSHN IRCDTWNLKR NEESWAKRRA RVIDCITHCS AHLPTIVGLQ EVKKNQLDDI
IQGLGSGWDY FGVGRDDGID KGEFAPIFYK SSEWQLVSGT TYWLSETPAK PSKGWDAALP
RIVTSIIVKH KQSGREIKCM NTHYDHKGKE ARNNSSRMIK ELASDHSHVC CVLGDFNAEP
DHVAYSILAS GNLLDTATNC FKRDGFQYTF SGFSKEESES TIDYIWVTLP ARILKFHVMN
NEFNDRNFSD HRPLSTIIQI
|
|---|
| |