| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30000 |
|---|
| Symbol | TAD3 |
|---|
| ID | 4837303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 1708384 |
|---|
| End bp | 1709361 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640388618 |
|---|
| Product | tRNA-specific adenosine-34 deaminase subunit |
|---|
| Protein accession | XP_001383092 |
|---|
| Protein GI | 150864324 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.903908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGAA AAGCTACAAA AGAGGCTCTA GAGCATGTGG ACCTAGTTAA TGGTACACTC
TACAACTCCT TGAAGCAAAT ACGTGTTGAT TGCAAAGGTG ACAATGGTGA TTTGCCAATC
TTAGTCAGTG TATGGTGCTG TCAGATTGAT ACAAAACAAA CGCAGAAACT AGCTTCATTG
ATCCGTGACT ACATCAATCC ATATGACGAT GTATCATTAA CACATTTGAA AAGATTTTCA
AGAGAGGAGG GAAAAGCAAT GAAATTGAAA TCCATTATTT GTTCTACTGA ATTTTTGGAA
ACAAAGGAAG ATGTTTGTGA GTTTATTAAA GAATATTCTG ATATACAGAT AGAGACAATG
CATGAGTTAA ATGTTCCACG TTTTCCACCA CCAACTAGGG AGATTTCTCA AAAGTGGTCT
TCAGCTTATT GGCCCGTTTC ATGGAAGGGG AACCCTAATC ATCAATTTTT AAACAGCGTT
GAAATTGACA TCGAATATGT CAGGAATTTG ATACACTCAT TAAAAGAAAT AGAAAAAGAA
TCGAATTCTA TTCTGGCGTC AATTTTCGTC AATCAGGAGA ATAAAATACA ATGTACTACA
AAATGCTATA GTCACAATGA CCCATTTCAG CATAGTATAA TGCAGGGCAT TGAACAAGTT
TCATTAGAAG AACAAAAGAA ACGGAAAGAT CTATCAACAT CAAAGCAAGA CCGTTCCAAC
TATTTGTGTC AGAATATGAC CGTATTTTCA TCCCACGAAC CTTGTGTAAT GTGCTGTATG
GCGTTGGTAC ATTCTCGAAT CAGTCGGTTA ATATATTTGA GATCCTCTCC AAGTAGTGGT
GGATTAGAAA CAAACTACCA ACTAGGTGAT CGTGAAGGAC TCAACTGGAA GTTCGAGATA
TGGAAATGGA TCGATCGAAA GAGTGAGTCA AATGTAGCTT CGTCGGACGA ATTACTATCA
AATCCGATCA ATTATTAG
|
|---|
| Protein sequence | MGRKATKEAL EHVDLVNGTL YNSLKQIRVD CKGDNGDLPI LVSVWCCQID TKQTQKLASL
IRDYINPYDD VSLTHLKRFS REEGKAMKLK SIICSTEFLE TKEDVCEFIK EYSDIQIETM
HELNVPRFPP PTREISQKWS SAYWPVSWKG NPNHQFLNSV EIDIEYVRNL IHSLKEIEKE
SNSISASIFV NQENKIQCTT KCYSHNDPFQ HSIMQGIEQV SLEEQKKRKD LSTSKQDRSN
YLCQNMTVFS SHEPCVMCCM ALVHSRISRL IYLRSSPSSG GLETNYQLGD REGLNWKFEI
WKWIDRKSES NVASSDELLS NPINY
|
|---|
| |