| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29844 |
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| Symbol | |
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| ID | 4837295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1321321 |
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| End bp | 1322943 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640388610 |
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| Product | predicted protein |
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| Protein accession | XP_001382475 |
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| Protein GI | 150863856 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2270] Permeases of the major facilitator superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.300774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.114506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGC TGAAAAAGTT GAAAGATCCC ACAATTGAGG AGGTAGGATA TTCTTCTACC
AGTGTTGATG AACAGGACAA TGATTCTCCA TGGGCAAAGA AAAGTATTTA TAGAGCTTGG
TTGTTGTTAT GTTACTCCAC AGGTCCAGTA GCTTCTATGT CTAGGACATA TGTTCCAGCA
GTTATTCAAT CTATTGCTAC CGAAGTTGGA AGAAATAGTA AAGGTGGTAG ATGTGAAAGA
AGAGGAAATG ATTGTTACAT TGATTTCGGT GTCGGAAAGG TACACTCCAC TTCTTTTGTT
CTCTACCTTA AAGCCATTTA CACCTCTCTT GAGGGATTGA TATCGATTTT TCTAATGGGC
ATTGCTGATT ACTCGAACTA CAGAAAAATC CTCTTGATAG GTTCAATTAC TTTATTTGGT
ATTTTTGCAC TTCCGTTTGC AGCCTTCACG GGAAAGAATT ATTCAACCCT AAAAACTATC
TCAGTATTCT ATGCTCTAAT GAGTGTAATT GATTCCGTCT ACCAGATATT AGAGGGGTCT
TATATTCCTC TTTTTATGAG GGCAGTGCCT AAAAAGCAGG ATGAAGTTGA AGAAGCTAGA
AACACCAGGG TTTTGCAAAG GGGATCTGTT GTGAGCGTCA TGGGATTATT CTTGGGAAAT
TGCGGTGGAC TTACAGCTCT ACTTATTGGC ATAATTATAT CTTATGGAAG AGGAGGTCCA
ATGGAAGATG GTTATCACAA TTTCTTGCTT GCAATTACTA TAGCAGGTTG CGTTACAGTT
GTCTTCTCTA TTATAAGTGC CTTCTATATC CCCAGTGTGA AAGGAAAACC TAAACCAGAA
GGCGAAATTT TGTTGTTCTT AACTGCAAGA AGATTTGTAA CGCTTTTGAA GAACATCCAG
AAGTATCCGA ATGCTTTCCT CTATTGTGTC TCCTGGGTCA TTTGGAATGT CAGCTTTAGT
AACTTCATGA GTGTATTCGT GTTGCTCTTT AGATCAACTC TAGGAATCGG CAATTCGGAT
TCAGAGTACA CTGTTTACAC ATTTATGTCG TATATTACTG CTTCATTGGG CTCGATTGCT
TGGATGCTTC TTTATCCACA ATGCGGAATC AAAATCAAGA CTTGGGGATA TGGATTTCTT
ATTTTTTCAG CTTTTACTAA CTTTTGGGGG TGTTTGGGAA TTAGAAAGTC TATTTCCATT
GGCTTTAAGA ACAGATGGGA GTTTTGGTTA TTTGAAGTAT TTTATTCAGG ATCGAGTTCT
GCAATGAGGT CTTTGAATAG AACCGTCTAT AGTTCACTTT TACCAGAAGG AGACGAGGCT
CAATATTTTG GTCTTGAAAT AATGTTAGGT GTAGCCACAG GATGGATTGG TTCATTGGTT
AATGCAGCCA TCCAGGACAG GACTAACAAC GACAGATTTC CCTTCTTGCC AAATTGTATT
TTGGTTCTTA TCTCACTTGT TTTGTATTCC CTAACTGATA CCGAGCAAGG CATGAGAGAT
GCTAAAAAAT TGGTAGAAGA CTCTATTCAA ATTAGAGATG ATCAGGCACT TGACCAAACA
GAAGGTTTGT CTGCTTCTTT CGACCACAAC GAGGAAAACT CTAACAAGTC TCTTTGTAAA
TGA
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| Protein sequence | MEQSKKLKDP TIEEVGYSST SVDEQDNDSP WAKKSIYRAW LLLCYSTGPV ASMSRTYVPA
VIQSIATEVG RNSKGGRCER RGNDCYIDFG VGKVHSTSFV LYLKAIYTSL EGLISIFLMG
IADYSNYRKI LLIGSITLFG IFALPFAAFT GKNYSTLKTI SVFYALMSVI DSVYQILEGS
YIPLFMRAVP KKQDEVEEAR NTRVLQRGSV VSVMGLFLGN CGGLTALLIG IIISYGRGGP
MEDGYHNFLL AITIAGCVTV VFSIISAFYI PSVKGKPKPE GEILLFLTAR RFVTLLKNIQ
KYPNAFLYCV SWVIWNVSFS NFMSVFVLLF RSTLGIGNSD SEYTVYTFMS YITASLGSIA
WMLLYPQCGI KIKTWGYGFL IFSAFTNFWG CLGIRKSISI GFKNRWEFWL FEVFYSGSSS
AMRSLNRTVY SSLLPEGDEA QYFGLEIMLG VATGWIGSLV NAAIQDRTNN DRFPFLPNCI
LVLISLVLYS LTDTEQGMRD AKKLVEDSIQ IRDDQALDQT EGLSASFDHN EENSNKSLCK
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