| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29756 |
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| Symbol | |
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| ID | 4837561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1060073 |
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| End bp | 1062541 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388876 |
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| Product | predicted protein |
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| Protein accession | XP_001382428 |
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| Protein GI | 150863823 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0699] Predicted GTPases (dynamin-related) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.500789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTGC AAGACCTCAT TCCCGTCGTC AACAAGCTTC AGGACATCGT GACCACGACC
CAGTTGGCTG AGTTGGATTT ACCCATTTTG GCAGTCGTAG GCTCTCAGTC ATGTGGTAAG
TCTTCTGTGC TTGAAAACAT CGTTGGACGC GACTTTTTGC CCCGTGGAAC AGGCATTGTC
ACCAGAAGAC CGTTGGTGTT GCAGTTGATG AACATCCTGG AAAACGACCC CGTGATCAAT
TCTGACACCG GATTTCGTTC GCTGAGTTCG TCTTTCAGTA ACGGTGAGGC GCTGGACGAA
GCAGTCAATT TGGAAGACCA TTTGAGACGA CATGCTGCCA ATGGGAGCTA CCAACCTCCC
AACGAATGGG GAGAATTCTT GCATATTCCC CATAAACGTT TCTATAACTT CCTGGACATC
AGAAGAGAGA TTGAAAATGA GACCCACAGA ATCGCCGGAC AAAATAAGGG TATTAGCAGA
TTGCCCATCA ACTTGAAGAT CTACTCTCCT AGAGTGTTGA ATTTGACGTT AGTGGACCTT
CCTGGTTTGA CCAAGATTCC TATCGGTGAC CAGCCCACAG ATATCGAGAA ACAAACGAGA
AACTTAATCT TGGAGTACGT GTCCAAGCCC AACTGTATCA TATTGGCTGT TTCGCCAGCC
AACGTAGACT TGGTCAATTC AGAATCATTG AAGTTGGCCA GACAAGTAGA TCCTACCGGT
AAGAGAACTG TGGGTGTGTT GACCAAATTG GACCTTATGG ATCAAGGTAC GAATGCGTTG
GATATCTTAA AAGGAAATGT ATATCCCTTA AAACTTGGAT TCATCGGGAT CGTCAACAGA
TCGCAACAGG ATATCTCAGA CAACAAGTCG TTAGATGATT CGTTGTTCTC TGAACAACAA
TTCTTCCAGA ACCATACGGC CTATAGGTCG ATGTCTAGCA AGTGCGGTAC CAAATACTTG
GCATTGACGC TAAACAAAAT CTTGATGACC CACATAAGAG ACAGATTACC AGATATCAAG
GCTAAGTTGA ACACTTTAAT GGGTCAAACT GAGCAAGAAT TAGCCAGTTA TGGCGAAATT
CCATCGCATT TGAAAGATTC CAAAGAATCC AGAGGTGCAA TGGTCTTGTC TTTGATGACA
AAGTTTGCTA CGACCTTTAT GAACTCAATT GAAGGAACGT CAGTTAACGA ATTATCAACA
AAGGAGTTGT GTGGAGGCGC CAGAATCTAC TATATTTACA ACGAGGTATT TGGCTCGCAG
CTAGCAGCCA TTAATCCTAC TCAGAACCTA ACCATTCACG ATATAAGGAT TGCTATTAGA
AACTCTACTG GGCCCAGGCC ATCCTTATTT GTTCCTGAGT TAGCCTTCGA TCTTCTTGTG
AAACCACAGA TCAAGTTGCT AGAGGATCCC TCACGTAGAT GTGTGGAGAT GGTCTATGAG
GAATTGATGA AGATTGTTCA CAATGTCTGC TCCTCCAATA TTGGACTTGA ATTGAACAGA
TACCCTCGCT TACAAAGCAA ATTGATCGAA GTAGTTTCTG ATCTCTTGAG AGAAAGATTG
GGTCCCACTA TAAAGTATGT GGAATCGTTG ATTGATATAC ACAAGGCTTA TATCAACACC
AACCATCCCA ACTTTGTGGG TGCAGCAAGA GCCATGAGCA TCGTTGTGGA AGAACGCCAG
AAGCAAAAGG AGTTCGAACA AAAAAGCAAA ATGAGACTCG CTAGCGAGCG AATTTTGAAC
AAGAAATACA GCGATTCAAT TGAAGAAGAA GAAGGAGACG ATGAAAAGAA CCCAGACGAA
GATATAAATT CTGTGGATGA CGTAATTCCT GTGAAACACA AGAGATCTGA ATCTGGAAAG
ACTTACTCAG TCAAGGCCGA ATCCACTCCT AATTTGGCAG GAAGCCAACA CAACCATTAT
CAGCAAGAAT CGTACTTGAA CTATTTCTTT GGTAAGGATC CAGTTATTCA CCAGCAACAC
ATGCAGACTC AGGCACAATT GAACCCAACT CCTTTTAAGT TTCCACATCA TCAAGAATCG
TTGCAATTCA ACTCCAACTT TGTCAATGGC ATGGCCAATA ACTCACAACC CAACTTGGAT
CATTTCAAGC TGATGAGTCT CACAGATTCC ATTCAAGACG ACTCGACGTC GTTTGAAAGT
GATGAAACTC TCAACGACTT GACTGAAAGA GAGCAGCTAG AATGTGAACT CATCAGACGT
TTGATCATCT CTTACTTCTG TATTGTTAGG GAAATGATTC AGGACCAGGT TCCCAAGTCT
ATTATGTGCT TGTTGGTCAA CTACATCAAG CAACATATCC AAAACCGTTT GGTGGTGAAG
TTGTACAGCG AAGACTTGTT CAATGAGTTG TTACAGGAAG ACGAAGGTAT TCAAGCGGAG
CGCGAAAAGT GTATGTCTTT GTTGAAGACC TATAGAGAGG CCTCTAGAAT TATCAGTGAT
GTCGTATGA
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| Protein sequence | MSLQDLIPVV NKLQDIVTTT QLAELDLPIL AVVGSQSCGK SSVLENIVGR DFLPRGTGIV
TRRPLVLQLM NISENDPVIN SDTGFRSSSS SFSNGEASDE AVNLEDHLRR HAANGSYQPP
NEWGEFLHIP HKRFYNFSDI RREIENETHR IAGQNKGISR LPINLKIYSP RVLNLTLVDL
PGLTKIPIGD QPTDIEKQTR NLILEYVSKP NCIILAVSPA NVDLVNSESL KLARQVDPTG
KRTVGVLTKL DLMDQGTNAL DILKGNVYPL KLGFIGIVNR SQQDISDNKS LDDSLFSEQQ
FFQNHTAYRS MSSKCGTKYL ALTLNKILMT HIRDRLPDIK AKLNTLMGQT EQELASYGEI
PSHLKDSKES RGAMVLSLMT KFATTFMNSI EGTSVNELST KELCGGARIY YIYNEVFGSQ
LAAINPTQNL TIHDIRIAIR NSTGPRPSLF VPELAFDLLV KPQIKLLEDP SRRCVEMVYE
ELMKIVHNVC SSNIGLELNR YPRLQSKLIE VVSDLLRERL GPTIKYVESL IDIHKAYINT
NHPNFVGAAR AMSIVVEERQ KQKEFEQKSK MRLASERILN KKYSDSIEEE EGDDEKNPDE
DINSVDDVIP VKHKRSESGK TYSVKAESTP NLAGSQHNHY QQESYLNYFF GKDPVIHQQH
MQTQAQLNPT PFKFPHHQES LQFNSNFVNG MANNSQPNLD HFKSMSLTDS IQDDSTSFES
DETLNDLTER EQLECELIRR LIISYFCIVR EMIQDQVPKS IMCLLVNYIK QHIQNRLVVK
LYSEDLFNEL LQEDEGIQAE REKCMSLLKT YREASRIISD VV
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