| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29610 |
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| Symbol | |
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| ID | 4837206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 681155 |
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| End bp | 683047 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640388521 |
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| Product | predicted protein |
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| Protein accession | XP_001382895 |
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| Protein GI | 150864177 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.926539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCCG GTATAGGTGA TGACGACGAA GAGTATCTAA AGAGATTTGT AACCGAATTT
CTTCCGGAAT TGCCTGACCA TGTGGTCTGG AGTATAGTCA ATATGCTTCC CCCAGAATAC
ATATTCGATT TCCTACTATA TCTTCCAGAT TCTGCCATTA GGGATGTTTT GAAAGACCAA
CTTTACAACA AGCAGCTCCA TCTCTTACTA CTACCTCGAA CGAGTAGTTA TAGGAAGGAG
CTAGTTACAG TTTCGCCATA TGTTAAGCTA ATGGGGTACT TTGAGATTAC CCAATTTCTT
CGAGATAACG AAGATTTGAA CCCAGCAAAG CTTGTATTGG ATGGGTGTGG AGATGTTCCT
TCTTTGAAGA GTATAATGGA AACCAATCGA GAACGACTAA CTACAAAAGT CGGCGATTTA
GTGGTATTGG CAGACAATGA CGTTACTACT GCTGATGTCA ACTTCTTCCT TTCTTTCCCC
AATTTGAAAA GGCTCCAGAT TCACCAATTG CAAACTAAAG AGAGGAACCT CGTACGAATA
AATGAGAATC TTAAAAAGCA CAAAAATCTA GATACAATTA TCTTCCTCGG ACATAACTAT
AGAGATTGGA CGGGTGTAGA ATTTCCAAGA AGTCTCAGTC ATTTGGATTT GTCGTGGTAC
GACTTTACAA AACCAGAAAC CATTCAACTT CCTCCAGGAC TCAAGGAATT GTATCTCAAC
AAGGCCGGTG TTAATCTGTT AAACATCTCG AAAATATCAT TTCCTGAGAA TTTGCACACT
TTGATGCTTA CCTATAACGA TATTGAAAGT GTTGACTTGT CAGATTTCCC TAGAAACCTC
AATACTCTAG ATCTTTCCTA TAACCGAATT CTGGATGTAT ATGATCGCAA AGGTACTGGC
TGGCCGTCAC AATTGAAGTC GTTATTGCTC ACACAATGTG GAATAGACGA TGCCATATTC
CAACAAATGG CAAGCTTAAA ATGGCCCCAG GACTTGAAGA ACATGGTACT CACCAATAAT
CCCATCACTT CATTTAGTAA TTTGGATTTC CCACCCAATC TTGAATTGCT TGACCTTTCT
TTGACCAGGT TAGGGTCGTT GTACGATACT AGGAACTCTC CTCATAAGGG TCCTTATTTC
ATATTTCCAG AATCATTGAA GATCCTCAGA ATGTTCGAGC TTTCGCTTCG TGTCAACGAG
GAATATCGAG GCTTGAGAAT GAAATTACCA TCTAGTTTAG AGCAGCTTGA TTTGACAGAG
TGTTTTCTTA GTCATCTTGA AATCTTTGAG TTTCCCAGAT CCTTACAAGT CCTAAGGATG
TCTGGAAACA AGATCAGTGA TTTGAAGTCT TACAATAATG AAGACGTCAA TTGGTCTCAG
TTGGTGAATT TGAAACGATT GGAAATGGAC TTCAACAGGA TCGGCGATCT TTCCGATTGG
TATCCTCCTC CTAATTTGGA GGTTTTGAAT CTCACACAGA ATCCTCTCCG AATGATCCAC
TCAAAATTTC CATTATTCAG TACACCTCCC GTTCTGTTGA AAGAGTTGAA TTTATCGTTC
TGTTCTATCG AAGATATAGA TGAGAAGATT ACACTACCTC CATTCTTGAA GATTTTCGAT
CTACATGACA ATTTTCTTCA GGATACATTC ACCATTCCGT CAGCAATCTG TGAACACAAG
CATTTGAAGC GATTGGACTT AAGCCGGAAT GGTATAACTA AGTTAAGTTA CGGAAGCAAG
GGTTCTTCAA AGTTGAAGAC ATTAGATCTT TCAGAGAATA TGATACGATC TTCACGAACG
GAATTGGAAG ACTTCTACAG TGCCATGGCT ACAGGATTGG GAGTAGTGGT TAGAAACAAA
CGATTCAAGA TTAACAGCAT ACATAATTTT TAA
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| Protein sequence | MSPGIGDDDE EYLKRFVTEF LPELPDHVVW SIVNMLPPEY IFDFLLYLPD SAIRDVLKDQ
LYNKQLHLLL LPRTSSYRKE LVTVSPYVKL MGYFEITQFL RDNEDLNPAK LVLDGCGDVP
SLKSIMETNR ERLTTKVGDL VVLADNDVTT ADVNFFLSFP NLKRLQIHQL QTKERNLVRI
NENLKKHKNL DTIIFLGHNY RDWTGVEFPR SLSHLDLSWY DFTKPETIQL PPGLKELYLN
KAGVNSLNIS KISFPENLHT LMLTYNDIES VDLSDFPRNL NTLDLSYNRI SDVYDRKGTG
WPSQLKSLLL TQCGIDDAIF QQMASLKWPQ DLKNMVLTNN PITSFSNLDF PPNLELLDLS
LTRLGSLYDT RNSPHKGPYF IFPESLKILR MFELSLRVNE EYRGLRMKLP SSLEQLDLTE
CFLSHLEIFE FPRSLQVLRM SGNKISDLKS YNNEDVNWSQ LVNLKRLEMD FNRIGDLSDW
YPPPNLEVLN LTQNPLRMIH SKFPLFSTPP VSLKELNLSF CSIEDIDEKI TLPPFLKIFD
LHDNFLQDTF TIPSAICEHK HLKRLDLSRN GITKLSYGSK GSSKLKTLDL SENMIRSSRT
ELEDFYSAMA TGLGVVVRNK RFKINSIHNF
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