Gene PICST_29461 details

Gene Information

• Locus tag: PICST_29461
• Symbol: APT1
• ID: 4836648
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Scheffersomyces stipitis CBS 6054
• Kingdom: Eukaryota
• Replicon accession: NC_009042
• Strand: +
• Start bp: 325342
• End bp: 325968
• Gene Length: 627 bp
• Protein Length: 182 aa
• Translation table: 12
• GC content: 44%
• IMG OID: 640387963
• Product: adenine phosphoribosyltransferase
• Protein accession: XP_001382293
• Protein GI: 126131536
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
• TIGRFAM ID: [TIGR01090] adenine phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.268301
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.53722
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTAATTT TTTTCAATTC CAAATTCACC ATCTCTACAG TTACTTACAC ACCTATTTAT 
CTTGTCATGT CAGTCGAACA GGAAATCGCC ACTCTTGCCA AAGAGCTCAA GGCCAACTTG 
AAGCAATTCC CCAACTTTCC CTCAGAAGGT ATTCTTTTTG AGGATTTCTT GCCTATTTTC 
ACCAAGCCAG ACTTGTTCAA CAAGTTGGTG AAGGCCTTCA AGTTGCATGT TGGTGACAAA 
AAGGTCGACT ATGTTGTTGG TTTGGAAAGC AGAGGCTTCT TGTTTGGTCC AGCTTTGGCA 
TTGGCCTTGA ATGCTGGTTT TGTTCCTGTC AGAAAGCCCG GTAAGTTGCC TGGTCCTACT 
TACTCTGTTG AATTCCAGAA GGAATACGGT TCTGACAAGT TTGAAATTCA ACAAGATGTT 
TTGCCTGCTG GCTCCAAGGT TTTGGTGGTG GACGACATTT TAGCTACTGG TGGAAGTGCC 
TTTGCTGCCG GCGAATTGGT GACCAAGAGC GGCGCTGAAA TCGTCGAGTA CTTGTTCGTC 
ATGGAGTTGG ATTTCTTGAA GGGAAGAGAC AAGTTAGGCA AGCCTGTGTT CACTTTGTTG 
AGCGGTCAAG AAGAGAAGCT TAAGTAG 

 

Protein sequence

MEIATLAKEL KANLKQFPNF PSEGILFEDF LPIFTKPDLF NKLVKAFKLH VGDKKVDYVV 
GLESRGFLFG PALALALNAG FVPVRKPGKL PGPTYSVEFQ KEYGSDKFEI QQDVLPAGSK 
VLVVDDILAT GGSAFAAGEL VTKSGAEIVE YLFVMELDFL KGRDKLGKPV FTLLSGQEEK 
LK