Gene Rsph17029_4080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_4080 
Symbol 
ID4894986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009040 
Strand
Start bp17411 
End bp18349 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content72% 
IMG OID640110482 
Productglycosyl transferase family protein 
Protein accessionYP_001041794 
Protein GI126464818 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones103 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value0.106116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CCCCGCCTCC CCGGATCGCG CTCCTTCTGG CCACCTACAA CGGAGCGGCC 
AATCTCGAGG CGCAGCTCGA GAGCTTCGCG GCCCAGACCC TGCGCCCAAC CTGGCTCGTG
GTGAGCGACG ACGGCTCGAC CGATGCCACC CGGGCGCTCC TCGCAGCCTT CGCCGCCCGC
CACCCCTGGC TCGCGCTGCG GCTCGTCGAG GGGCCCTGCC GGGGGTCGGC GCAGAATTTC
CTCCATCTGC TGGGTCAGGT GCCGCCCGAG GCCGACATGG CCGCCCTCTC GGATCAGGAC
GATGTCTGGC TGCCCGAGAA GCTCGCCCGC GGCGCGGCGG CGATGGCCGA TCTGCCCGCG
GACCTGCCCG TCCTCTACGG CGGCTCGAGC TGGATCTGCG ACGCGGAGCT CGGCAACCGC
CGGCCCTATC CGCTGCCTGT CCGCCCGCCG GGCTTCCGCC ATGCGCTGGT CCAGAACATC
GCCGGCGGCA ACACGATGAT GCTGAACCGC GGTGCGATCG CGCTGCTCGC CGCCGCCAGC
CGCGAGCCCG AGCGGATCGT CGTCCATGAC TGGTGGATCT ACCAGATCGT CTCGGGCGCG
GGCGGGCGGG TGATCTTCGA TCCGGTGCCG CTCCTGCTCT ATCGCCAGCA CGGCGGCAAC
CTGATCGGGG CGAACGACGG GTTCCGCGCC AAATACCGGC GGCTGAGGAT GCTGCTGAGC
GGCGGCTTCC GGCAGTGGAA CGCGATCAAC ATCCGCGCGC TCTCCGCCTC GGCGCACCGT
TTCACCCCCG AGAACCGCCG GCTTCTGGCC GAGTTCGAGG CGCTGCGCCG CGCCGGCCCC
TGGGGGCGGC TCCGGCAGCT GAAGCGGATC GGCCTCTACC GGCAGGGGCT GCCGGGGCGG
CTCTCGCTCT GGCTGGCCGC GGTGCTGGGG CGGATCTGA
 
Protein sequence
MTDAPPPRIA LLLATYNGAA NLEAQLESFA AQTLRPTWLV VSDDGSTDAT RALLAAFAAR 
HPWLALRLVE GPCRGSAQNF LHLLGQVPPE ADMAALSDQD DVWLPEKLAR GAAAMADLPA
DLPVLYGGSS WICDAELGNR RPYPLPVRPP GFRHALVQNI AGGNTMMLNR GAIALLAAAS
REPERIVVHD WWIYQIVSGA GGRVIFDPVP LLLYRQHGGN LIGANDGFRA KYRRLRMLLS
GGFRQWNAIN IRALSASAHR FTPENRRLLA EFEALRRAGP WGRLRQLKRI GLYRQGLPGR
LSLWLAAVLG RI