Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_3204 |
Symbol | |
ID | 4809506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3794968 |
End bp | 3797370 |
Gene Length | 2403 bp |
Protein Length | 800 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640108638 |
Product | CRISPR-associated helicase Cas3 |
Protein accession | YP_001039592 |
Protein GI | 125975682 |
COG category | [R] General function prediction only |
COG ID | [COG1203] Predicted helicases |
TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 [TIGR01596] CRISPR-associated endonuclease Cas3-HD |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCTTT CGCACCCGGG AAAGCTGCTT TTGGACCATT TGAAAAATGT GTTTTTAATC GGAGACTGTA TTTTAATGCA GAAAAAGACC GAATTTGAGA GTTTTTCAGA ACATGATATT CGCCAATTAA ACAAATTGAA TTTACTTACT CATGATCTTG GCAAGGCTAC ATCGTATTTT CAGGATTACA TAAGAAATTT GGATGATAAT ACACAAAAGA ATGATGAAAG GAAAAGGCAC GGTCTTTTGT CAGGGGTTTT GTCCTTTAAA ATTGTAAATG CAGTTATGAA GAATGAAATA CTTGCTTTTT TATCTTATAT GGTGGTTTCA AAACATCATG GTGAGCTTGA CGATTTTACA AATTTTATAT CTGTAATAAG CGGTGACGAA AAGAATAAAA CTCTTTTAAA GCTGCAATTT GAAAGTATAG ATAAAGGTAA GTTGCAGGAA GTCATTACAA GGCTTGGAAT TGATTTTGAC ATATTGAGTT ATACGGTTGA TGAGTTTGAA AACGACATTG ATTATATTAC TTCGAGAAAG GTCAGAAAGA AAGTAAAGGA GCTAATGGGA CTTGAAATAT TCCTGCTAAT TGATTATCTT TTTTCTTTAT TAATCTTTTC TGATAAACTT GAGGCGATAT ACAATAGTGA AAATATGAAT ATTGAAGAAT TTATTGAAAA AAACACAAAT AGGCCCAGGA TTTCATCGGA TTGTGTTGAT AAATTCAAAA AAAGCCTTGA AATAAAAAAT ATTCGGATGG CCGAGTGGCG GAACAGGGCA TATCAGGATG TTTTGGGCAG TGTTGAAAAT CTTTCGCTTG AAGAAAAAAT ATTGTCCATT AACCTTCCCA CCGGTTCCGG AAAAACACTT ACAGCTCTTA AAGCTGCTTT GCGGTTGAAG GAAAGACTGA TTGAAGAAAA GGGATATAAT CCAAGAATTA TTTATGTACT TCCCTTTACT TCGATTATTG AGCAAAATTT TGATGTTTTT CAGAAAGTTT TAGGCACTAC CGAGTCAAAT GTACTTTTAA AGCATCATTA TTTATCCCAG AGGGTCTACC AATGGGAAAA GGAAGGAGAA ATAGAGAGCT TAAGTGATAC TGTTTCCGAA CATCTTGTGG AGTCGTGGGA TTCGGAAATA GTTGTAAGTA CCTTTGTGCA GTTATTGCAT TCTATTTTTA CAAACAGAAA CAGAAAGCTT AAAAAGTTTC ACAATATTGT TAATTCAATA ATAATATTGG ATGAGGTGCA GAGTATACCC CACAGGTATT GGAATCTTGT GCGGGAAACT TTTAGTGCCA TGGCAAAGTA TCTTAACTGT CATTTCATTT TTATGACTGC AACCATGCCA TTGATTTTTT CTGAAGAAAA CAAGGAAATA TATGAATTGG TAAAGGATAA GAGGAAATAT TTTGAAGAGT TTAGCCGTAT AACCATTGAT GCGAAAAGAT TGACGGACAA AACTACACTG GATGAATACA AAACATTGTT ATTGGATGAT ATTCTCCGAT ATAAAAAGGA CGACTTTCTG ATAGTTATGA ATACAATTAG AACTTCCATT GAGATATATT CATTTATAAA AGAGGAATTA AAGGATGAGG CAGAGATATA TTATCTTTCG ACCAATATCA TTCCGAAGGA GAGGCTTGAC AGAATAAAAA AGATAAAGGA AAGCAAGAAT CGCAAGATAA TTGTATCAAC CCAGATGATT GAAGCCGGTG TGGATATTGA TATTGACCGG GTCTACAGGG ATTTTGGCCC AATGGACAGT ATAAACCAGA CGGCGGGAAG ATGCAACCGT GAATGGGGAG ATAAAAAGGG ACTTGTTACG CTGGTGAATT TGGTAAATGA AAATCATCAT AGCAGGCCTT ATGCAACATA TATCTATGAC AATGTATTGA TAGAGGAGAC GAAAAAGGCA CTTTCAGGGC TTGAAATGAT TGAGGAAAAA GAGATTTTTC ATCTTGCAGA AAAGTATTAT GTGGGATTGA AAAGCCATGG AAGTGATGAA AGTCAAAAAC TTTTGGATTG CATAAAGGAA CTTCGTTACA GGGAAGCTTT TGAATGTGGA AAGGATGATA AAAATTCCGG AGTATTTGAA CTTATACGAC AGGACTTTAA TACGGTGGAC GTGTTTATCG AAATAGATGA TGACGCAACC GAAGTATGGC AGGAGTATCA GAGTATAAAA AAGATAAAAG ACAGGTTTGA GCGAAAAAGG AAATTTAATC AGTTCAAAAA AGACTTGTAT ATGTATGTGC TCAGTCTTCC CGAATTTGCT GTCAGAAAGC AGGTTGATAT TGATGAAAAG GATATAACTT TCATAAACCG GGAAATGGTT TTTAATACAT ATGATAAAGA TACGGGTTTT ATGAGGGATT TGGAAAAAGA CTACTTTTTT TAA
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Protein sequence | MLLSHPGKLL LDHLKNVFLI GDCILMQKKT EFESFSEHDI RQLNKLNLLT HDLGKATSYF QDYIRNLDDN TQKNDERKRH GLLSGVLSFK IVNAVMKNEI LAFLSYMVVS KHHGELDDFT NFISVISGDE KNKTLLKLQF ESIDKGKLQE VITRLGIDFD ILSYTVDEFE NDIDYITSRK VRKKVKELMG LEIFLLIDYL FSLLIFSDKL EAIYNSENMN IEEFIEKNTN RPRISSDCVD KFKKSLEIKN IRMAEWRNRA YQDVLGSVEN LSLEEKILSI NLPTGSGKTL TALKAALRLK ERLIEEKGYN PRIIYVLPFT SIIEQNFDVF QKVLGTTESN VLLKHHYLSQ RVYQWEKEGE IESLSDTVSE HLVESWDSEI VVSTFVQLLH SIFTNRNRKL KKFHNIVNSI IILDEVQSIP HRYWNLVRET FSAMAKYLNC HFIFMTATMP LIFSEENKEI YELVKDKRKY FEEFSRITID AKRLTDKTTL DEYKTLLLDD ILRYKKDDFL IVMNTIRTSI EIYSFIKEEL KDEAEIYYLS TNIIPKERLD RIKKIKESKN RKIIVSTQMI EAGVDIDIDR VYRDFGPMDS INQTAGRCNR EWGDKKGLVT LVNLVNENHH SRPYATYIYD NVLIEETKKA LSGLEMIEEK EIFHLAEKYY VGLKSHGSDE SQKLLDCIKE LRYREAFECG KDDKNSGVFE LIRQDFNTVD VFIEIDDDAT EVWQEYQSIK KIKDRFERKR KFNQFKKDLY MYVLSLPEFA VRKQVDIDEK DITFINREMV FNTYDKDTGF MRDLEKDYFF
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