Gene Cthe_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3175 
Symbol 
ID4809626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp3752522 
End bp3753205 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content40% 
IMG OID640108609 
Producthypothetical protein 
Protein accessionYP_001039563 
Protein GI125975653 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.979599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAATAA TTGTCGTAAG AACTTTGATA CTTTATATAC TTGTAGTAAT TATCATGAGA 
ATTATGGGCA AACGCCAGAT TGGACAGCTT CAGCCCTTTG AGCTGGTTAT TGCAATAATG 
ATATCGGAAC TTGCCGCAGT GCCCATGCAG GATAAAAGAA TACCTTTGAT AAACGGCATA 
ATTCCAATAC TTACTCTGTT ATTCGCCCAG ATAACCTTTT CTTTTATAGG TCTGAAAAGT 
ACCAGGGCCA GAGCCATAAT CTGCGGCAGA CCCAGTATTT TAATTCAAAA CGGCAAAATA 
AACGAAGCGG AACTCAGAAA AGAGATGTAC TCCGTAAACG ACCTGCTTGA GCAGCTTAGA 
ATTAAAAACA TATACAATAT AGCCGATGTT GAGTTTGCAC TTTTGGAAAC CAACGGGCAG 
CTCAGTGTCA TACCCAAATC ACAAAAAAGG CCCGTAAGCC CTGAGGACCT CAATATACCT 
ACAAAATATG AAGGTTTGTC CCTGGACATT ATTGTTGACG GCGAGATAAG CCACGAAAAC 
CTCAAACTTG CCAACCTTGA TGTAAACTGG CTGAATGACA CGCTTTCCAA ATTCGGGATA 
AACAATCCGA AGGACGTGCT TTTGGCAAGC CTTGACTCTG AAGGCAAACT CTATTATCAG 
CTTAAAGAAA GGAGAAATAA CTAA
 
Protein sequence
MLIIVVRTLI LYILVVIIMR IMGKRQIGQL QPFELVIAIM ISELAAVPMQ DKRIPLINGI 
IPILTLLFAQ ITFSFIGLKS TRARAIICGR PSILIQNGKI NEAELRKEMY SVNDLLEQLR 
IKNIYNIADV EFALLETNGQ LSVIPKSQKR PVSPEDLNIP TKYEGLSLDI IVDGEISHEN 
LKLANLDVNW LNDTLSKFGI NNPKDVLLAS LDSEGKLYYQ LKERRNN