Gene Cthe_3154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3154 
Symbol 
ID4809604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3726159 
End bp3726710 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content43% 
IMG OID640108587 
Producthypothetical protein 
Protein accessionYP_001039542 
Protein GI125975632 
COG category[S] Function unknown 
COG ID[COG4720] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000133194 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATT CAAGCAGAAT CAATGCCACC AGAAAGATAG CAGTAAACGG AATGATGATT 
GCATTGGTTT TTTTGGCTAC CTATGTTACA AAAATACCTA CGGCGGTCGG TCCATTTAAT
CTTGGGGATT CGGTTATAAT AATAGCGGCA GTTCTTTTGG GAAAAAAGAG CGGTTTTCTG
GCGGGAGCCA TAGGGTCGTC GGTTGCGGAT ATTGCAATGG GATACCAGCA TTTTGCACCC
GTCACATTTG TCGTAAAAGG CTTTGAGGGA TTTGTGGCAG GATTGGTTGT GCATGTTTTG
TCCAAAAGAT TTAAAGAAAA ATATCATGTA ACTTTTCTGA TTGCGTCGAT AGCCGGAAGT
ATCGTCATGG TATTAGGGTA TTTTTTCGCA GAGCTCTATG TAATGAGGCT GTTTGATGAG
ACCATGGGGC TTGCGGCGGC TTTAAGGGGC CTTCCGGTAA ACCTGGTTCA GGGCGGCGTT
TGTACGGTTG TCGGATATCT GTTGTGCGTG GCTCTTGAAA GGTTTAAAGT AACCAAATTT
ATTGCAAGTT AA
 
Protein sequence
MNNSSRINAT RKIAVNGMMI ALVFLATYVT KIPTAVGPFN LGDSVIIIAA VLLGKKSGFL 
AGAIGSSVAD IAMGYQHFAP VTFVVKGFEG FVAGLVVHVL SKRFKEKYHV TFLIASIAGS
IVMVLGYFFA ELYVMRLFDE TMGLAAALRG LPVNLVQGGV CTVVGYLLCV ALERFKVTKF
IAS