Gene Cthe_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3140 
Symbol 
ID4809703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp3708668 
End bp3709306 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content35% 
IMG OID640108573 
ProductTetR family transcriptional regulator 
Protein accessionYP_001039528 
Protein GI125975618 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAAG AAACCTTTTT TAACCTTCCA AAGGATAAAA GAAACCTAAT AATCTCAGCT 
GCTATGGACG AATTTTCCAA AGCCGGCTAT AATACGGCCA GTATAAATCA AATATGCAAA 
AAATCAAACA TTCCCAAAGG AAGCTTCTAT CAGTACTTTA CAGACAAGCT GGATCTATAC 
GTTTATATAA TGACTTTGAC TATAGAAGAA AAAATCAAGT TTTTCTCAAG TGCTATAGCA 
GAATTTCATA CCCTGACTTT CTTGGAGCAG TTTCGTTTGC TTTTTCTCAA AGGTTTGGAA 
TTTGCAAAAA AACATCCTCA ATATGCTGCC CTGGCTGACC AATTTTCCAA AGAAGATAAC 
GAATCGGTCA AGTCGGCAGT TATAAAGGAA GGAGACAAGC AAGCAGAATC ATTGTTTATG 
CAAATGATAC ACAATGCAAA AACTAAAGGT GAAATAGACA GCAAAGTTGA CTCTTTAGCC 
TTATGTTTAC TGCTGCAATC CTTAAACAGT GCAGTCAATA AATATATGAT TGGCAAGTTT 
GGCGGCATTA GTTATGAGTA CAATCAAGAA GACATAAATA ATTTTGTAGA TTCGCTCTTA 
GATATTATAT TTAGCGGGAT TCAGAATAAA GCTGATTAA
 
Protein sequence
MPKETFFNLP KDKRNLIISA AMDEFSKAGY NTASINQICK KSNIPKGSFY QYFTDKLDLY 
VYIMTLTIEE KIKFFSSAIA EFHTLTFLEQ FRLLFLKGLE FAKKHPQYAA LADQFSKEDN 
ESVKSAVIKE GDKQAESLFM QMIHNAKTKG EIDSKVDSLA LCLLLQSLNS AVNKYMIGKF 
GGISYEYNQE DINNFVDSLL DIIFSGIQNK AD