Gene Cthe_3119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3119 
Symbol 
ID4809682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3679832 
End bp3680494 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content39% 
IMG OID640108552 
Productflavin reductase-like, FMN-binding 
Protein accessionYP_001039507 
Protein GI125975597 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG1773] Rubredoxin
[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAA AAGCTTTATG GAATTTATCT TATGGGGTCT ATATTGTATC TGTCTGGGAC 
GGAGAGCGTC CGACAGGATG TGTGGTCAAC AGTGCCATGC AGATTACGGC GGAACCTGCA
ACGGTTGCAA TAAGTGTTCA TCATGACAAC TATACAAACG GATGCATTGA AAAGACAGGC
AGGTTTGCAA TTACCGTGCT GTCTGAAAAG ACGGAACCTT CAATTATAGG AACTTTTGGA
TTCCAGACAG GCAAAGAAAT TAACAAGTTT GATTCTGTAA AGTATGATTT AAAAAACGAT
ATGCCAATTG TAAAGGATGG GTGTGCTTAT CTTGTCTGCG AAGTGATTAA CAAGATGGAA
ACAAGCACCC ATACTGTTTT TTTGGGAAAA GTACTGGATG CAGATTTTAT TTCCGACGAA
GAACCCATGA CTTATTCCTA TTATCATAAG GTAATAAAAG GAAAAAGTCC CAAGAATGCT
CCGACATATA TCGGAGTGGA GAATGAAACA GAGGAAAACA AACTAAAGGA AAAAAGAGCA
AAATATGTGT GCAGTATATG TGGATATGAA TATACAGGGG ATATACCTTT TGAGGACTTG
CCGGAAGATT ATGTCTGTCC TGTATGCGGA CAGCCTAAAT CGGTATTTGT AAAGAAAGAA
TAA
 
Protein sequence
MNQKALWNLS YGVYIVSVWD GERPTGCVVN SAMQITAEPA TVAISVHHDN YTNGCIEKTG 
RFAITVLSEK TEPSIIGTFG FQTGKEINKF DSVKYDLKND MPIVKDGCAY LVCEVINKME
TSTHTVFLGK VLDADFISDE EPMTYSYYHK VIKGKSPKNA PTYIGVENET EENKLKEKRA
KYVCSICGYE YTGDIPFEDL PEDYVCPVCG QPKSVFVKKE