Gene Cthe_3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3115 
Symbol 
ID4809678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3676143 
End bp3677156 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content42% 
IMG OID640108548 
Producthypothetical protein 
Protein accessionYP_001039503 
Protein GI125975593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATAA AGGACGACCA CATTTTCCGA ATGACCGATG ATACGGGTAT GTTACAGCAC 
TCCAAGTACT CCCTTCCGGA CCCGAATCAC GGGTATACAA CGGATGACAA TGCCAGAGCC
CTGATTATGG CGTTGATGTT ATATAAAAAG TATGGTGAGA AAAAGTATCT TGATCTTGTT
TACAGATATT CATCTTTCTT ATTGAATGCA CAGAATGAAA AGGGCAAGTT CAAAAACTTC
ATGGGATATG ACCGAAAATG GCTTGAAGAC GAGGGTTCGG AAGACTGCTT CGGGAGATGC
CTGTGGGCGA TTGGATTTGC TCTTTCCGGT GATTTTACCC CCAGAGGGGT TAAACATGCT
CTCCTGGAAA TTTTCAATAA AGCTATGCCC CATGCGGCAA ATCTTAGTTA TCTGAGGGGA
AAAGCATATT CTGCAATAGG TCTTTCGTTT TTTGACGGTG ATGATTCAAA AGAACTTGTT
TTCAGCATAG CCCAATCTCT CTGCTGCCAA TATGATGAAC ACAAAGACGG AGAATGGAAA
TGGTTTGAAG ATGTTGTGTC ATATTGCAAC AGCGTTCTTC CGTGGTCTCT TCTTACAGCC
TACAAAGTTA CAGGAGAAAA AAGGTTTCTT GAAACGGCTG AGGAAAGTCT GGACTTCCTT
GGGAAAATAA CTTTCAAGGA CGGATATTTC AAACCTGTCG GATGCAATGG GTGGTTTAAA
AAAGGTAAAG AGCAGGCTGA ATTTGATGAA CAGCCGGTCG AGGCCTGCGA AGCTGTTTTA
ACCTATTTAG AGGCTTTTGA ATTAACGGGA AAGACAAAGT ATCTGGAAAA AGCAAAGATA
TGCAATGCAT GGTATTCGGG AATGAATTCC AAAGGAATAC CTCTTGTTGA TCCTGAGACG
GGAGGCTGCT ATGACGGCCT TACCCAAAAA GGAGTTAATC TGAATATGGG CGCGGAAAGC
CTGGTATCTT ACATAATATC ATACTTGAAA ATGTCTGAAA TCAAATCTTT ATAG
 
Protein sequence
MIIKDDHIFR MTDDTGMLQH SKYSLPDPNH GYTTDDNARA LIMALMLYKK YGEKKYLDLV 
YRYSSFLLNA QNEKGKFKNF MGYDRKWLED EGSEDCFGRC LWAIGFALSG DFTPRGVKHA
LLEIFNKAMP HAANLSYLRG KAYSAIGLSF FDGDDSKELV FSIAQSLCCQ YDEHKDGEWK
WFEDVVSYCN SVLPWSLLTA YKVTGEKRFL ETAEESLDFL GKITFKDGYF KPVGCNGWFK
KGKEQAEFDE QPVEACEAVL TYLEAFELTG KTKYLEKAKI CNAWYSGMNS KGIPLVDPET
GGCYDGLTQK GVNLNMGAES LVSYIISYLK MSEIKSL