| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3028 |
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| Symbol | |
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| ID | 4811100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 3551120 |
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| End bp | 3552316 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640108449 |
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| Product | histidine decarboxylase |
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| Protein accession | YP_001039417 |
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| Protein GI | 125975507 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.726503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACAC AGCAAAATTT ATTTATTAAT TCAATATTTG ATACTTCTGT TACTGCAGAT
TTGAAATCAA ATAGTGAAAG TTTACTTGAA GAAATCGATA AAATTTACGA AGATTTATAC
GAAAAGCACC AGCATTATCT TGGATATCCA TTCAATTTAA ATCTGGAATA CGCTGAGTTT
GGCAAATTTC TAAATTTACA GCCCAACAAT CTCGGCGATG CATTCTATTC TTCAACAGTT
AACATTGATA CAAAAAAGCA AGAACGGGAA GTCTTAAAAT TTTTTGCAGA TGTATACAAA
CTTCCCTGGG AAGAAGCCTG GGGTTACATA GGACACGGCG GCACCGAAGG AAACCTCTGT
GGAATGTTGG TTGCCCGCGA ACGTTATCCT GATGGAATAT TCTATTTCTC TGAAGCCAGT
CATTACAGTA TAAAAAAGAA TGCCTGGATA TTGGGCAAGC CGGGTGAGGT GATTCCATCC
CAGCCCAATG GAGAATTTGA TTATAATGCA TTAATTGAGC GAATACTTAA AAACGGCAAC
AAACCGGTTT TACTTGTCGC AACATTGGGA ACAACCATGA CCGGTGCCAT TGATAATGTC
CAAATTATTG TTGACTTGTT CAAAAAGCAC AATATCAAAG AGTATCATAT TCATTATGAC
GGTGCGCTTT TCGGCGGAAT GATACCGTTT ATGGAAAATG GACCGGAACT TAATTTTGAA
ACCCTGCCCA TCGATTCTAT CGCAATCAGT GGTCATAAAT TTGTAGGTTG TCCCATGCCG
GCAGGTATTT TCCTCACACG TAAAAAATAC ATTCAAAAAA TCCTTGAAAA TTCAGATGTA
TCTTACGTAG GCACCAAAGA CACTACTATA AGCGGTTGTC GCAACGGGCT TTCAGCATTG
CTTCTTTGGT ATCAGATAAA CCGCAAAGGT GTGGAAGGAT TCAAACAGGA TGTAAGACAA
TGCATGGAAG TGACCGCATA TGCCAAGGCC AGATTGGATT CTATCGGCTG GAATAACTTT
GTGAATCCAT GGTCAAACAC TATTGTAATA GACAAACCAA ACGATGCAAT ATGCAATTAC
TGGTCTTTGG CCTGCGAAGG AGATAAAGCA CACATAATAA TCATGCAGCA TGTTACAAAA
GAACATATTG ATTTGTTCAT CGAACATTTA CTAAACAGCA AATATACCAT AAATTAA
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| Protein sequence | MSTQQNLFIN SIFDTSVTAD LKSNSESLLE EIDKIYEDLY EKHQHYLGYP FNLNLEYAEF
GKFLNLQPNN LGDAFYSSTV NIDTKKQERE VLKFFADVYK LPWEEAWGYI GHGGTEGNLC
GMLVARERYP DGIFYFSEAS HYSIKKNAWI LGKPGEVIPS QPNGEFDYNA LIERILKNGN
KPVLLVATLG TTMTGAIDNV QIIVDLFKKH NIKEYHIHYD GALFGGMIPF MENGPELNFE
TLPIDSIAIS GHKFVGCPMP AGIFLTRKKY IQKILENSDV SYVGTKDTTI SGCRNGLSAL
LLWYQINRKG VEGFKQDVRQ CMEVTAYAKA RLDSIGWNNF VNPWSNTIVI DKPNDAICNY
WSLACEGDKA HIIIMQHVTK EHIDLFIEHL LNSKYTIN
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