| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2973 |
|---|
| Symbol | |
|---|
| ID | 4810861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3492514 |
|---|
| End bp | 3493215 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640108395 |
|---|
| Product | sugar fermentation stimulation protein |
|---|
| Protein accession | YP_001039363 |
|---|
| Protein GI | 125975453 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
|---|
| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTG AAGGAGAACT TGTTAAAGCA AAGTTTGTCA AAAGATTAAA CCGGTTTGTA
GCTCTTGTGG AAGTTGACGG GGTACAGGAA TTTGCCCATG TTCCGAATAC GGGAAGATTG
AAAGAACTCC TGGTGGACGG GGCGGCTGTG ATGGTCAGAA AGTATGACAA AACTGACCGC
AAGACCCGTT TTGGGCTCAT ATTGGTAAGA AAAAACGGGA TATGGGTATC CATTGATTCT
GCGAATGCGC CCAACAGAAT AATGTATGAA GCACTGGTGC AGGGGAAATT TGATAAATTT
CGGGACTATA GCGAAATACG CAGGGAAGTA ACCGTGTTAA ACAGCCGCTT TGACTTTGGA
CTGTTTTCTG AAGGTAAAGA ATATTATATT GAAGTTAAAG GGGTAACACT TGTGGAAAAC
AGGCAAGGTT TTTTCCCCGA TGCTCCCACC CAAAGGGGTA CCCGGCATCT TGAAGAATTG
ACAAAAATAA GGCAAAATGG CAAAGAGGCA GGAGTTGCCT TTATTGTGCA GAGAGAGGAC
GCGGATGTTG TAAGGCCCAA TGACAGGACG GACAAGAACT TTGCCAATGC GCTGAGAATA
GCCGCGGAAG CCGGCGTTGA CCTCATGGCC TACGTATGCA AAGTTGATGC GGAACAAAGA
AGAATGGACA TTGTCCGCGA AATACCGGTA ATAATAAAAT AG
|
|---|
| Protein sequence | MRIEGELVKA KFVKRLNRFV ALVEVDGVQE FAHVPNTGRL KELLVDGAAV MVRKYDKTDR
KTRFGLILVR KNGIWVSIDS ANAPNRIMYE ALVQGKFDKF RDYSEIRREV TVLNSRFDFG
LFSEGKEYYI EVKGVTLVEN RQGFFPDAPT QRGTRHLEEL TKIRQNGKEA GVAFIVQRED
ADVVRPNDRT DKNFANALRI AAEAGVDLMA YVCKVDAEQR RMDIVREIPV IIK
|
|---|
| |