| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2972 |
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| Symbol | |
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| ID | 4810860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 3490091 |
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| End bp | 3492142 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640108394 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001039362 |
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| Protein GI | 125975452 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAA AATTACTGGT AACTTTCCTG ATTTTAATTA CTTTTACCGT TTCACTGACT
TTGTTTCCGG TAAATGTACG CGCTGATGTA GTAATTACGT CAAACCAGAC GGGTACTCAT
GGCGGGTACA ACTTTGAGTA CTGGAAAGAC ACCGGAAACG GAACCATGGT CCTCAAAGAC
GGTGGTGCGT TCAGCTGCGA ATGGAGCAAT ATCAACAATA TTCTTTTCCG TAAAGGTTTC
AAATACGATG AAACAAAGAC ACATGATCAA CTTGGATACA TAACGGTAAC TTATTCCTGC
AACTATCAGC CAAACGGAAA CTCTTATCTG GGAGTCTACG GATGGACCAG CAATCCGCTT
GTAGAGTATT ACATCATCGA GAGCTGGGGA ACCTGGAGAC CACCGGGAGC AACACCAAAG
GGCACTATTA CCGTTGACGG TGGTACATAC GAGATATACG AGACCACCAG AGTTAACCAG
CCTTCCATCA AAGGTACAGC TACTTTCCAG CAATACTGGA GTGTACGTAC ATCAAAACGT
ACAAGCGGAA CCATATCCGT AACCGAACAC TTTAAAGCCT GGGAACGTCT GGGTATGAAA
ATGGGAAAAA TGTATGAGGT TGCTTTGGTT GTAGAAGGAT ACCAGAGCAG CGGAAAAGCC
GACGTAACCA GCATGACAAT TACTGTTGGC AACGCACCGT CAACATCATC ACCACCAGGT
CCGACACCTG AACCGACTCC AAGAAGTGCT TTTTCAAAAA TCGAAGCTGA GGAGTACAAC
TCCCTCAAGT CATCAACCAT TCAGACCATA GGCACTTCCG ACGGAGGAAG CGGTATAGGT
TATATTGAAA GCGGTGACTA TCTGGTATTT AACAAAATAA ACTTTGGAAA CGGCGCAAAC
TCTTTCAAGG CAAGGGTTGC ATCCGGTGCG GACACACCCA CCAATATCCA GTTAAGACTC
GGAAGCCCGA CCGGTACTCT TATAGGAACT CTTACGGTGG CTTCCACAGG TGGTTGGAAC
AATTACGAGG AAAAATCCTG CAGCATAACC AACACTACAG GACAGCACGA CTTATATCTG
GTATTCTCAG GTCCTGTTAA CATTGACTAC TTCATATTCG ACTCGAATGG CGTAAATCCT
ACACCCACCT CTCAGCCTCA ACAAGGCCAG GTTTTGGGTG ACTTGAACGG AGACAAACAA
GTAAATTCAA CAGACTACAC AGCACTGAAG AGACATTTGC TCAATATAAC CAGACTTTCA
GGAACTGCTC TTGCCAACGC CGATTTAAAC GGTGACGGCA AAGTTGATTC CACTGACCTT
ATGATTCTAC ACAGATATCT TCTCGGTATA ATTTCATCTT TTCCACGCAG CAATCCACAA
CCAAGCAGTA ACCCTCAACC AAGCAGCAAT CCGCAGCCAA CGATTAATCC AAATGCGAAA
CTGGTGGCTC TTACCTTTGA CGACGGTCCG GACAACGTAC TTACGGCACG GGTTCTCGAC
AAGCTTGATA AATATAACGT TAAGGCTACA TTCATGGTAG TAGGTCAGAG AGTCAATGAT
TCGACGGCTG CCATCATCAG AAGGATGGTT AATTCAGGCC ATGAAATAGG AAACCACTCA
TGGAGTTATT CAGGCATGGC CAATATGAGT CCGGATCAGA TAAGGAAATC CATTGCCGAT
ACAAATGCAG TTATTCAAAA ATATGCTGGA ACAACACCCA AGTTCTTCCG TCCGCCGAAC
CTCGAAACAA GCCCAACATT ATTCAACAAT GTTGACTTGG TGTTTGTCGG CGGCTTAACG
GCAAATGACT GGATTCCATC CACAACCGCC GAACAGAGGG CTGCCGCAGT TATAAACGGT
GTCAGAGACG GTACAATAAT TCTTTTGCAT GATGTTCAAC CTGAGCCACA CCCGACACCG
GAAGCTCTGG ATATAATCAT CCCTACACTT AAGAGCCGGG GCTATGAATT TGTGACCTTG
ACTGAGTTGT TCACGTTAAA GGGTGTGCCA ATTGACCCAT CAGTCAAAAG AATGTATAAC
TCTGTACCGT AA
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| Protein sequence | MKQKLLVTFL ILITFTVSLT LFPVNVRADV VITSNQTGTH GGYNFEYWKD TGNGTMVLKD
GGAFSCEWSN INNILFRKGF KYDETKTHDQ LGYITVTYSC NYQPNGNSYL GVYGWTSNPL
VEYYIIESWG TWRPPGATPK GTITVDGGTY EIYETTRVNQ PSIKGTATFQ QYWSVRTSKR
TSGTISVTEH FKAWERLGMK MGKMYEVALV VEGYQSSGKA DVTSMTITVG NAPSTSSPPG
PTPEPTPRSA FSKIEAEEYN SLKSSTIQTI GTSDGGSGIG YIESGDYLVF NKINFGNGAN
SFKARVASGA DTPTNIQLRL GSPTGTLIGT LTVASTGGWN NYEEKSCSIT NTTGQHDLYL
VFSGPVNIDY FIFDSNGVNP TPTSQPQQGQ VLGDLNGDKQ VNSTDYTALK RHLLNITRLS
GTALANADLN GDGKVDSTDL MILHRYLLGI ISSFPRSNPQ PSSNPQPSSN PQPTINPNAK
LVALTFDDGP DNVLTARVLD KLDKYNVKAT FMVVGQRVND STAAIIRRMV NSGHEIGNHS
WSYSGMANMS PDQIRKSIAD TNAVIQKYAG TTPKFFRPPN LETSPTLFNN VDLVFVGGLT
ANDWIPSTTA EQRAAAVING VRDGTIILLH DVQPEPHPTP EALDIIIPTL KSRGYEFVTL
TELFTLKGVP IDPSVKRMYN SVP
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