Gene Cthe_2933 details

Gene Information

• Locus tag: Cthe_2933
• Symbol: rplQ
• ID: 4810216
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 3449038
• End bp: 3449562
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640108356
• Product: 50S ribosomal protein L17
• Protein accession: YP_001039324
• Protein GI: 125975414
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0203] Ribosomal protein L17
• TIGRFAM ID: [TIGR00059] ribosomal protein L17

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGCGC AAAGGAAACT CGGACGTCCA ACCGACCAGA GAAAAGCGGT TTTAAAGAGT 
CTTGTTACGG CTTTGTTTCA AAACGGCAAG ATAGAAACTA CTGAAGCGAA AGCGAAGGAA 
GTTAAAAATA TAGCTGAAAA GCTTATTGCA ATAGCAGTAA AGGAATGTGA CAACTTCACA 
TCCAAGCAGG TAAAAGTAAG TGCTGCAAAG CTGGATTCAA AGGGTAACAA GATTACTAAC 
ACGAAAAAGT CCAAGAATGG AAATGAGTAT CTGGTTGTAG AAAGAGAAAT CAAGACAGAC 
ATGCAAAGAG TTGACAACCC TTCAAGACTC CATGCAAGAA GGAAAGTAAT GAGCTGGTTG 
TATAGAGTCA AAGACAGTGA AGGGAATACA ATCAACCTTG CAAACAAGCT GTTTGACGAA 
ATTGCGCCTA AGTACAGGGA TGTGCAGGGC GGATATACAA GAATGTACAG AATCGGCCCA 
AGAAAAGGCG ACGCTGCAGA AATGGTAATT CTGCAATTGG TTTAG 

 

Protein sequence

MPAQRKLGRP TDQRKAVLKS LVTALFQNGK IETTEAKAKE VKNIAEKLIA IAVKECDNFT 
SKQVKVSAAK LDSKGNKITN TKKSKNGNEY LVVEREIKTD MQRVDNPSRL HARRKVMSWL 
YRVKDSEGNT INLANKLFDE IAPKYRDVQG GYTRMYRIGP RKGDAAEMVI LQLV