| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2884 |
|---|
| Symbol | |
|---|
| ID | 4809091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3411174 |
|---|
| End bp | 3411761 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640108303 |
|---|
| Product | imidazoleglycerol-phosphate dehydratase |
|---|
| Protein accession | YP_001039275 |
|---|
| Protein GI | 125975365 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0131] Imidazoleglycerol-phosphate dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.008915 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGAA AGTTTGAAGT AAGCAGAAAA ACCGGAGAAA CCGATATTAC TTTAAGCATA
AATATTGACG GTTCCGGCAA AAGTAACATC TCCACGGGAG TAGGGTTTTT TGACCATATG
CTTAATTTGT TTGCAAAACA CGGTCTTTTC GACCTGGATG TAAAAGCAAA GGGTGATTTG
GAAATTGATG CCCATCATAC CGTGGAGGAC GTGGGAATTG TACTTGGCCA GGCGATAAAG
CAGGCTCTGG GTGAAAAGAA ATCCATCAGA AGGTATGGTT CTTCTTTTGT TCCCATGGAT
GAAGCGCTGG TGCTGGTTGC CCTTGATTTA AGCGGAAGAC CTTACTTGGT TTTTGATGCG
GAGCTTAAAT GTGAAAAGCT GGGCAATATG GAGACGGAGC TTGTTGAAGA GTTTTTCCGG
GCGGTTGCCT TCAATGCCGG CATAACTTTG CATGTCAAGG CATTATACGG CAGCAATACC
CACCATATAA TTGAGGCTAT GTTCAAAGCC TTTGGAAGAG CTCTGGACGA TGCCACCAGA
AAAGATGACA GAATTGAAGG GGTTATGTCA ACTAAAGGAA TGTTGTAA
|
|---|
| Protein sequence | MDRKFEVSRK TGETDITLSI NIDGSGKSNI STGVGFFDHM LNLFAKHGLF DLDVKAKGDL
EIDAHHTVED VGIVLGQAIK QALGEKKSIR RYGSSFVPMD EALVLVALDL SGRPYLVFDA
ELKCEKLGNM ETELVEEFFR AVAFNAGITL HVKALYGSNT HHIIEAMFKA FGRALDDATR
KDDRIEGVMS TKGML
|
|---|
| |